| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2882 |
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| Symbol | |
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| ID | 5209851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 3596782 |
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| End bp | 3597558 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640596478 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001277200 |
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| Protein GI | 148656995 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGGT TACTTGACGG AAAAGTCGCT ATTGTGACCG GCGCCAGTCG GGAGATCGGC
GCTACGATGG CTGAATTGCT GGCGGCGCAT GGGTGCGCAG TGCTGGCGGC GCACTTCGGT
GAGGCGGAGC GTGCGGAGGC GCTGGCGGAA CGCATTCGTG CAAACGGCGG GCGCATCCTG
ATCCACGACG CCGATCTATC GCGGGTTGCG GCGAACCAGG CATTGATCGC ACGCGCCGTG
GATGCCTTTG GGCGCGTCGA TATTCTGGCG GCGAACGCCG GACTGACCAT CAGCGCGCCC
TTTCTCGCCA CAACCGAAGA ACAGTGGGAC ACCCTGTTCG ATCTGAACGT CAAAGGATCG
TTCTTCGCCG CGCAGGCCGC CGCACGCCAG ATGATCGCGC AGCAAAGCGG CGGGCGCATC
ATCTTCTCCG CTTCGGTGAC CGGCGTGCAG GCAATTCCCG GCTTGAGCGC CTATGGGATC
ACCAAGGCGG CGCTGCGTCA TATGGCAAAA ACGCTGGCGT GCGAACTCGG TCTGTATGGC
ATTACGGTCA ATGCGCTGGG CATCGGGGCC ATTGTGAATG AACGCAACCG CAACGACGAC
CCGGAGTACG AAGCGCACTG GGGACGCGTC ACACCCACCG GGCGCGTCGG ACTGCCGACC
GATGTGGCGC AGGCGCTCCT GTTCCTGGCA TCGCCAGAAG CGGCGCACAT CACCGGTCAG
ACCCTGATCA TCGACGGCGG CTGGACGCTG ACCAGTCCTC TGCCGCCATC TTCCTGA
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| Protein sequence | MSRLLDGKVA IVTGASREIG ATMAELLAAH GCAVLAAHFG EAERAEALAE RIRANGGRIL
IHDADLSRVA ANQALIARAV DAFGRVDILA ANAGLTISAP FLATTEEQWD TLFDLNVKGS
FFAAQAAARQ MIAQQSGGRI IFSASVTGVQ AIPGLSAYGI TKAALRHMAK TLACELGLYG
ITVNALGIGA IVNERNRNDD PEYEAHWGRV TPTGRVGLPT DVAQALLFLA SPEAAHITGQ
TLIIDGGWTL TSPLPPSS
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