| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2863 |
|---|
| Symbol | pyrB |
|---|
| ID | 5209832 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 3573844 |
|---|
| End bp | 3574800 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640596459 |
|---|
| Product | aspartate carbamoyltransferase catalytic subunit |
|---|
| Protein accession | YP_001277181 |
|---|
| Protein GI | 148656976 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0540] Aspartate carbamoyltransferase, catalytic chain |
|---|
| TIGRFAM ID | [TIGR00670] aspartate carbamoyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.694024 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTAC CTGCGGAGGC GGGAAAACGA CGGGATCGTC GCCGGCACGT GCTCGATCTC
GACGATTTCT CAACTCAGGA GATCGAAGAG ATTCTCGAAA CCGCCGTCAG CATGAAAGAG
GTGCTGGGGC GGGCAATCAA GCAGGTGCCG ACCCTGCGCG GTAAAACGAT CGTCAACATG
TTCTTTGAAG AGAGCACCCG CACCCGGATT TCGTTTGAAC TCGCCGGGAA AGCGCTCTCC
GCCAATGTCG TCAACTTCAC GGCGCGCGGC AGCAGCGTCG AGAAGGGTGA ATCGCTGATC
GACACCGTGC GAACATTGCA GGCGCTTGGC GCCGATATGC TGGTCATGCG CCACAGTGAG
TCAGGAGCGC CGTACCTGGC AGCGCAGTAT TTCCACGGTT CGGTGATCAA CGCTGGCGAC
GGGCGCCATG CGCACCCGAC CCAGGCGCTC CTCGATCTCT TTACAGTGCG GCAGCGACTG
GGGCGTATCG AGGGTCTCAA GGTGGTGATC GTCGGCGACA TTCTGCATAG CCGGGTTGCG
CGGTCTAATC TGTGGGGCTT TACCCGTATG GGCGCTTCGG TGACACTCTG TGCGCCGCAG
ACGTTGATCG GTCCGGAGTC GTTCTGGAAA GCGACCTGGC CCGACCTGAC GATCACCAGC
AACCTGGACG AGTGTATCAA AGATGCCGAT GTGATTATGA CCCTGCGCTT GCAGAAGGAG
CGAATGGAAG CAGGGTTGCT CCCTTCCCTG CGAGAGTACA GTCGCTTTTT TGCCATCACT
GCTGAGCGCG TGGCGCGCGC TGCGCCGCAC TGCCTGGTGA TGCACCCCGG TCCGATGAAC
GAAGGCGTCG AGATCATGCC CGATGTCGCC ACATCAGCCC AATCCGTGAT CGAAGAGCAG
GTCGCGAATG GCGTGGCAGT GCGGATGGCG TTGCTCTACC GTCTCTCTGG CGAGTGA
|
|---|
| Protein sequence | MSVPAEAGKR RDRRRHVLDL DDFSTQEIEE ILETAVSMKE VLGRAIKQVP TLRGKTIVNM
FFEESTRTRI SFELAGKALS ANVVNFTARG SSVEKGESLI DTVRTLQALG ADMLVMRHSE
SGAPYLAAQY FHGSVINAGD GRHAHPTQAL LDLFTVRQRL GRIEGLKVVI VGDILHSRVA
RSNLWGFTRM GASVTLCAPQ TLIGPESFWK ATWPDLTITS NLDECIKDAD VIMTLRLQKE
RMEAGLLPSL REYSRFFAIT AERVARAAPH CLVMHPGPMN EGVEIMPDVA TSAQSVIEEQ
VANGVAVRMA LLYRLSGE
|
|---|
| |