| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2842 |
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| Symbol | |
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| ID | 5209811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 3546324 |
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| End bp | 3548681 |
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| Gene Length | 2358 bp |
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| Protein Length | 785 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640596439 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001277161 |
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| Protein GI | 148656956 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCACCT GTCCCTGTGT GAAGATGCTG GCGCACCTCG TATCCGTGCC GTCACCTGTA
GAAACCACTA TGGATCTCGA ATCGCTCCGT GCTGAGAATA ACGCCTTGCG TGCTCGTATG
CGCGAACTTG AGGACGAACT TCAGCGTCTT CAGAGGACGG CGCACACCGA CCATCTCTCT
TCTGGCGAAT CTCGCACAGA TTCCCCTGAC TATTTCGCGG TATTGCACGA AACGGCGCTG
GCGATCATGA GTCGCCTCGA CCTGAACGAT GTGCTTGAAA CCATCATGAT GCATGCAGCG
CGTCTGGCAG GAGCGAATGA CGGGTTTATC GATCTGCTGT CGCCCGATGG CACGTTGCTG
GAGATGAAGA TCGGCATCGG TAAACATGCC CGGAATCGCG GCAGCGTGAT CGCAATCAGT
GAAGGTATCA GCGGACGTGT CTGTCAAACC GGTGCGCCCA TGATGGTTGA GGACTACCGC
AACTGGGAAG GACGGGTGCG CTCGATCGAT ACGTCTGATT TCGGGACGGT CATTGCCGTG
CCGCTGCGAT TGAGATCGGC GATCATTGGG GTGTTGGGCG TTTCCTACGA TACGCCGACC
CTGGAAGGGT TCGAGTCGAT CGTGACACTG CTGATGCGCT TCGCCGAACT TGCAGCAATT
GCCATCGATA ACGCGCGTCT CTATACAATC GCGCAGGAGG AACTGGCAGA ACGCCGGCGT
ATCGAGAACG AAGTGCGCGC GAATGAGCAA CGGATGCGCG ATCTCTATGC CGTCACGCGA
CGGCAGGCGC AGGAGTTGCA CCTGATCGGG CAGGTGCGCG AAGCCATGGC ACGTGAGATC
GATCTGCCCG CCCTGTTTCG TACCGTCGTT GAGTCGATTG CGGCAACATT TGGATACTCG
CTCGTCTGTC TCTATCTGCG CGACGGCGAC GAACTGGCGC TCCAGCATCA GGTAGGCTAT
GCTGTTCAAC TGGATCGCAT TCCCTTCGGT CGAGGCGTCA TCAGTCGCAC GATCCTCAGC
GGTCGGGCGA CACTGATCGC CGATGTGCGC AGCGACCCGG ATTTCATCGG TGTGATGGAC
AACATCGTAT CGGAGATTTG CGTACCGCTG CGCGACCAGG ATCGGGTCAT TGGCGCGCTC
AATATCGAAA GCACCGATAG TGTAGTGTTG ACCGACGACG ATCTGCGCGT GATGACCGAA
CTGGCGGAGC ACATCAACGT CGCCATCGAG CGCGCCCGGC TCTATGAACA ATTGTGGCGG
CGAGTGCAGC AACTCGATGT CTTGTACGAC ATCATGACCG ATATTACCGG CAATCTGGAT
CGCGATACGG TGCTGAAGGC AATCGTTGAG CGGACAATAG CCCTGCTGCG CGTCACGCAC
GGAATGATCG CTTTGTATGA TCCAGAACAG AACAATTTAC GGATTCATTA CAGCGTCGGT
ATGAACCGTG ATTACGCCGG TATGCGGATT GCGCCCGGCG AAGGCGTCAT CGGCAGAGTA
GCGCAGACGC GCCAGCCGCT CGTGGTCTAT GACTACAACC AATGGGAGGG GCGCACGCCG
CTGTTTCAGG AAATGCCGTC GTCAAATGTC CTTGGTGTGC CGCTGCTGTC CGGTGATGAA
TTGATCGGCA CGCTGAGCGC TGGCGATTTC AATCTCAAGC GGGTGTTCAC CGACGACGAC
ATACGTCTGC TCAGCATATT TGCGCAGCAG GCGACGATTG CCATCAAGAA TGCGCGTTTG
TTCGCCGAAG TGCAGCATCT GGCAATCACC GATCCACTGA TGGGCATCTA CAACCGGCGC
TACTTTTTCA GCGCGGCGAC ACGTGAATAT GAGCGCGCGC GGCGTCATCA TCACGCTCTG
TCGGTGCTCA TTGCCGATCT CGACAATTTC AAGCAGATTA ATGATCGCTA TGGTCATCCG
ATTGGTGATC AGGTGTTGCA GGCGGTCAGC AGCATCTTTC GCCGTGAACT GCGCTCGATT
GACCTGCTTG CTCGCTATGG CGGCGAGGAA ATTGTTGTGC TGCTGCCCGA AACCGATTGC
AGCGGAGTTG TGCGGGTCGT CGAACGCCTG CGGTCGCGTC TGATGAGCGC GATACCGACC
GAGCGCGGCG ACGTGCACAT CACCGCGAGT TTTGGCGCAG CGGTGAGTCA GCGTATCAGG
ACGCCGGATG TCGAGACGCT GATCGCCTGC GCCGATCAGT CGTTGCTCTA CGCCAAACAG
CAGGGAAAGG ATCGTCTGGT CATCTGGTGT GACATGTGTG ATGCGGCCGG TCATTGCCCC
CATATTGCGC CGCATATGTC GCCGCCCCGG GTGAGTACTA TCTTCCTCTC GCCCGGGAAG
CCGGACGAAT CAGTGTGA
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| Protein sequence | MRTCPCVKML AHLVSVPSPV ETTMDLESLR AENNALRARM RELEDELQRL QRTAHTDHLS
SGESRTDSPD YFAVLHETAL AIMSRLDLND VLETIMMHAA RLAGANDGFI DLLSPDGTLL
EMKIGIGKHA RNRGSVIAIS EGISGRVCQT GAPMMVEDYR NWEGRVRSID TSDFGTVIAV
PLRLRSAIIG VLGVSYDTPT LEGFESIVTL LMRFAELAAI AIDNARLYTI AQEELAERRR
IENEVRANEQ RMRDLYAVTR RQAQELHLIG QVREAMAREI DLPALFRTVV ESIAATFGYS
LVCLYLRDGD ELALQHQVGY AVQLDRIPFG RGVISRTILS GRATLIADVR SDPDFIGVMD
NIVSEICVPL RDQDRVIGAL NIESTDSVVL TDDDLRVMTE LAEHINVAIE RARLYEQLWR
RVQQLDVLYD IMTDITGNLD RDTVLKAIVE RTIALLRVTH GMIALYDPEQ NNLRIHYSVG
MNRDYAGMRI APGEGVIGRV AQTRQPLVVY DYNQWEGRTP LFQEMPSSNV LGVPLLSGDE
LIGTLSAGDF NLKRVFTDDD IRLLSIFAQQ ATIAIKNARL FAEVQHLAIT DPLMGIYNRR
YFFSAATREY ERARRHHHAL SVLIADLDNF KQINDRYGHP IGDQVLQAVS SIFRRELRSI
DLLARYGGEE IVVLLPETDC SGVVRVVERL RSRLMSAIPT ERGDVHITAS FGAAVSQRIR
TPDVETLIAC ADQSLLYAKQ QGKDRLVIWC DMCDAAGHCP HIAPHMSPPR VSTIFLSPGK
PDESV
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