| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2828 |
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| Symbol | |
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| ID | 5209797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 3524536 |
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| End bp | 3529461 |
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| Gene Length | 4926 bp |
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| Protein Length | 1641 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640596425 |
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| Product | endonuclease/exonuclease/phosphatase |
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| Protein accession | YP_001277147 |
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| Protein GI | 148656942 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2374] Predicted extracellular nuclease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTCATC CCAATCGCCG CCCGGTTGCG GCGCAGCGCC TGGTCATTGC AGCGGCAATG
CTGGCGTTGC TCTTCGCTGG CATGCTCGGA ATCGCGCAAC CGGCGACCGC AACCACCACG
ATCATCACCC AGTGGACATT CAATTCCCCG ACGCCTGACA ACAACACAAA TACTGGCACG
ACCGATCCGG CGATCGGCAG CGGAATCGCT TCCCTCGTCG GCGGCACAAC TGCGACATTC
GCCAGCGGCG ATGCGAGCGG CGGCAGCACC GACCCCGCCA CCGGCGATGA CTCGGCGTGG
AATACAACCA CCTATGCGCC GCAGGGAACT CAGGATCGCC AGCGCGGCGT CCAGTTCGCC
GTCAGCACGG TCGGGTATCA GAACATTCTC TTCAGTTTCG ACCTGCGTCA TAGTAATACC
GCCGCCAACA CCGTCGCGCT GCTCTATTCG ACCGATGGCG GCGCGACGTT TAGCGAAGCT
ACCACCTTTG TGGCGACCGC GGGCGATGCG TGGTTCAACA ATCGCTCGTT CGACTTCAGC
AGCATCCCGG CGCTGAACAA TAATCCGAAC GTCGTGTTCC GCGTGGTGGC AGCGTTTGCC
GCCAGCAGTA GCGTCTACGC GCCGTCCAAT CCGGGAAGCA GCTACGGCGC CAGCGGCACC
CTGCGCTTCG ATATGGTCAC CGTGCGCGGC GAGCCGATCA GCAGCGCCAC CCCCACCCCC
TCGCCAACAC CAGAACCGAC CCCGGTTCCG GTTGCCTGTA GCGCACCGGA TACGCCGATC
AACCAGGTGC AGGGGAACGG CGCCACGACC CCGCTCAGCG GCACGGTCGT CACCATTCAG
GGCGTGGTCG TCGGCGACTA TGAAGGTGCG ACGCCGAATC TGCGCGGTTT CTACATTCAG
GAGATTGCCC AGGTCGATGC CGATCCGCTC ACGTCCGAGG GCATCTTCGT TTTCAACAGC
AACAACGACT CCGTCAGCCT CGGTCAGGTC GTTCAGGTGA CCGGCACGGC GACCGAGTTC
CAGGATCAGA CCCAGATCGG GAATGTGACC GCCATCGAGT TCTGTGGAAC CACCGCGACG
GTTGCTCCGG TCGATGTTTC CATGCCCTTC CCGGACGCGA CCTATCTGGA GCGCTATGAG
GGCATGCTGG TACGCTTCCC GCAAACGCTC TACGTCACCG AACATTTCCA GTTGGGGCGC
TTCGGGCAGG TTGTGCTGAG TTCGGGCGGG CGCCTGCGCC AGCCGACCGA CGTTGTGGCG
CCGGGACCGG CGGCGCTGGC ATTGCAGGAT GCCAACAATC TCAACCGGAT CATTGTCGAT
GATGAGTTGA ACAACCAGAA CCCCGATCCG ATCCGTTTCG GACGCGGCGG CAATCCGCTG
AGCGCCAGCA ACACTCTGCG GGGCGGCGAC ACGGTGACGG GACTGGTCGG CGTGATGACC
TACACCTGGG CGGGCAACCC TGCCAGCGGC AATGCCTACC GGGTGCGTCC GGTCAATGCG
CTTGGCGGCG GCGTGCCCAA CTTTGTCGCC GCCAACCCGC GCCCCGATCT GCCGGTCAAT
GTCGGCGGCG ATATGCAGGT GGCAGCGTTC AACGTGCTGA ACTACTTCAA CACCTTCACC
GGCTGTACGC TGGGTGTCGG CGGCGCTACG ACCGGTTGTC GCGGTGCGGA GAACGCAACC
GAATTCGAGC GCCAGAACGC CAAACTGATC CAGGCAATCC TGCGTCTGGA TGCAGAGGTG
CTTGGACTGA TCGAGGTTGA GAACGATGGG TACGGACCCA ACAGCGCGCT CGCCGAACTC
GTGAATCGGC TGAATGCCGC CACAGCGCCG GGAACCTACG CTTTCATCGA CGTCGATGCT
GCAACCGGAC AGGTGAATGC CCTCGGCACG GACGCGATCA AGGTGGCGCT GATCTACAAG
CCCGCCGTGG TGACGCCGGT AGGACAGACG GCAGTGCTCA ACACGGTTGC GTTCGTCAAC
GGCGGCGACT CGGCGCCGCG CAACCGCCCC GCGCTGGCGC AGACTTTCCG CCACCGCGCC
AGCGGCGAGG ATGTGACTGT TGTTGTCAAT CACCTCAAGT CGAAGGGAAG CCCGTGCGAT
GTCCCGGACG CTGGCGATGG ATCGGGCAAC TGCAACATCG TGCGACGCAA CGCTGCGCAG
GAGTTGGTTA CCTGGCTGGC GACCGACCCG ACCGGCACAG GCGACCCGGA CATTCTGATC
ATAGGCGACC TCAACTCCTA TGCCCAGGAA GATCCAATTG ACGTCCTCCG TGCAGCGGGG
TACACCGACC TGGCGCGCAC CTTCGTCGGC GAGAGCGCCT ATTCTTACGT GTTCAACGGT
CAGTGGGGGT ATCTCGACTA CGCCCTGGCA TCGCCTCCGG CGCTGGCGAA GGTCAGTGGG
GTGAGCGAGT ACCACATCAA CGCCGATGAG CCGAATGTGC TCGACTACAA TCTGAACTTC
AAGAGCGTGG GGCAGCAGAC GAGCCTGTTT GCGCCAGACC AGTATCGCAC CTCAGACCAT
GATCCGATCC TGGTCGGATT GAACCTGAAC GACCCAATTG CAATCTCGGC AGTGGCAACT
TTCGGAGCGA GCCAGGGCAT CACCGGCGCC GAAATCATTG ACATTCGCGG GAACCGCGCA
GTGTTGAGCA ATGCTGACGC TGGCATCGTG TATGTGCTCG ACACTACCGA CCTGTTCAAC
ATCCGCGTCC TGACGACCAT TACCGGATTG ACCGGGTTGA ACTCGGTTGC CATTCACCCG
ACACAGGACT ACTTCCTGGC GGTTGCCGGT TCGGCGGCGC CGGCAGCAGC GCCTGTGAAT
GGGACGGTCT ATGCCTATCG TCTCGACGGC ACGTTGATCG CCAGCGCGAG CACGGGTATT
CAGCCCGACT CGGTCGCTAT TTCGCCGAAC GGGCAGTATG CTGTGATTGC GAACGAGGCA
GAGGGTTTCG CCGTCGGTGA CAACGGCGGA CCAGGGTCGC TGACGGTGGT CGATCTGAGC
AGTTTTGACC CGGATACCTC GACCACGCTG AGCTTGACGC AGATCTCGCT GCCTTCACAG
GCGAGTACGC CTGGTTTCAT GACCAACCGC ACCGACGATA TTGCCCGACT GCTCATCGAC
AACACGCCTG CGACCCTGGA GCCGGAATCG GTCGTCTTCT CGGCAGACAG CCAGTACGCC
TATGTCTCGC TTCAGGAGAA CAACGGCGTG GCACGCCTTA ACCTGGCGGA CAACAGCCTG
ACGTTCTTCG GGCTGGGGAA GACGACCCAC GTGTTCGATA CGGTCAACGG CGGTGGCTTC
AACCCCACGC GGTTGTTGAG CCTGTTCCGC GAGCCGGATG GCATCGCATA CATTGAGATC
GGCGGCAATG GCTACTTCGT GACGGCTGAT GAAGGCGATA CGCGCGACGA TATTCCACCG
GGTGCGATCA GCGGACGGGT GCGCGGCGGT CGCACGGTCA GCGTCTTCGA TGCCACTACT
GGCATGCTGG TTGGTGACAC TGGCAACCAG ATCGACGAAC TTGCGGCGCG CTATGGTCTG
TACCCGGACA GCCGCAGCGA CCGTGGCGGT TCCGAGCCGG AGGTGCTGGA CGCGAAGGTG
TTCGGCGGAC GGGCGATTGT CGCCGTTGGG CTGGAACGCG CCCGGTCGGT GGCGCTGGTT
GATGTGACCA ACCCCGCTGC GCCGAACGTC TTCCTGCTGT TGCCAGCCGG CACGAACCCT
GAAGGGGTCA AACTGTTCGA ACGCAACAGC GCGCTGTATG TTCTGGCAGC CAACGAAGTC
AGCAATGACC TGACTGTGGC GCGCGTACCA CTCGGCGATC TGCTCTTCAC CCAGACGTAC
ACCGAAGAGA CGCCGCTGGC GTTGTACGAC CCATTTGTCA TCGATCCAGA CTCGGCGCCG
GTGACGGTGA CGCTGACGGT TGATCCGGCG ACTGCAGGAA CGCTCAACGC AACCACGATC
AGCGGCGCAC CTGCCGCTGT GAATGCAGCG CTGGCGAATC TGACGTTCAC CCCGGCGCTC
AACTATGCCG GTCCAGTGAC GATGACTCTC AGCGCCACCG ACGGGCAAAC CGAAACGAGT
GGACGCATCC TGCTCAACGG CATCGCCATT CCGCCGGTGA CAACCGCGAG CGTCAGCGGA
CCGACCACGC CGCTCTGCCC GGCAGACTGC TTCTTCGGCA GCGCGACGAT CACGCTGACG
ACCGATGAAC CGGCGACGAC GCAGTACCGT GTGAACGGCG GTCCGTGGCA GACGTATACA
ACGCCTTTCG CAATCACAAG CGAAGGCGCG AACCTGGTTG AGTTCTTCTC AACCGACGAG
TGGGGCGCTG TTGAAGAAGT GAAATCGATC ACGGTGAAGG TCACGACCTT CCCGGCGACC
GGCATCCTCG ACACCTTCAA CCGCGCGAAT GGACGGCTGG GACGTAACTG GACCGGCGCG
ACGCAACTCG ACCAGTATCG CATCGCCGGT AACCGGGTCG ATGTCGAGCA GGGTGGCGCC
GTGCTGTGGA AAACCCAGTT TGGCACAGAT CAAGAAGCCT TCGTCACGTT GACCGCGATT
GACCCCAACA GCGCACACCA CACGCTGCTG CTGAAGGGGC GCGGCACAAA CGCAACGCAG
GGCGCCATTC TGGTCTCCTA CGATGCCGTG AATCGCCAGA TCGTTGTTGA GGCGCTTCAG
CCCGGATGGG GATGGCGCAC GGTGCGTGTC TTTACGAACG TGACCCTCAC CAACGGTGAC
GTGCTTGGCG CGCGCGCGCT GGCTGACGGC TCGGTTCGCG TCTATGTCAA CTGCACACTG
ATCGGTGTTG CCGATACAAC CACAGTTGTC GGCAACCTGT ACGTCAACCG CGGCGGTCGC
ATCGGTCTGT TCTATCACCA GGCGAACAAT GCGCTTCTCG ACGACTTCGG CGGCGGCAAT
CGGTAG
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| Protein sequence | MVHPNRRPVA AQRLVIAAAM LALLFAGMLG IAQPATATTT IITQWTFNSP TPDNNTNTGT
TDPAIGSGIA SLVGGTTATF ASGDASGGST DPATGDDSAW NTTTYAPQGT QDRQRGVQFA
VSTVGYQNIL FSFDLRHSNT AANTVALLYS TDGGATFSEA TTFVATAGDA WFNNRSFDFS
SIPALNNNPN VVFRVVAAFA ASSSVYAPSN PGSSYGASGT LRFDMVTVRG EPISSATPTP
SPTPEPTPVP VACSAPDTPI NQVQGNGATT PLSGTVVTIQ GVVVGDYEGA TPNLRGFYIQ
EIAQVDADPL TSEGIFVFNS NNDSVSLGQV VQVTGTATEF QDQTQIGNVT AIEFCGTTAT
VAPVDVSMPF PDATYLERYE GMLVRFPQTL YVTEHFQLGR FGQVVLSSGG RLRQPTDVVA
PGPAALALQD ANNLNRIIVD DELNNQNPDP IRFGRGGNPL SASNTLRGGD TVTGLVGVMT
YTWAGNPASG NAYRVRPVNA LGGGVPNFVA ANPRPDLPVN VGGDMQVAAF NVLNYFNTFT
GCTLGVGGAT TGCRGAENAT EFERQNAKLI QAILRLDAEV LGLIEVENDG YGPNSALAEL
VNRLNAATAP GTYAFIDVDA ATGQVNALGT DAIKVALIYK PAVVTPVGQT AVLNTVAFVN
GGDSAPRNRP ALAQTFRHRA SGEDVTVVVN HLKSKGSPCD VPDAGDGSGN CNIVRRNAAQ
ELVTWLATDP TGTGDPDILI IGDLNSYAQE DPIDVLRAAG YTDLARTFVG ESAYSYVFNG
QWGYLDYALA SPPALAKVSG VSEYHINADE PNVLDYNLNF KSVGQQTSLF APDQYRTSDH
DPILVGLNLN DPIAISAVAT FGASQGITGA EIIDIRGNRA VLSNADAGIV YVLDTTDLFN
IRVLTTITGL TGLNSVAIHP TQDYFLAVAG SAAPAAAPVN GTVYAYRLDG TLIASASTGI
QPDSVAISPN GQYAVIANEA EGFAVGDNGG PGSLTVVDLS SFDPDTSTTL SLTQISLPSQ
ASTPGFMTNR TDDIARLLID NTPATLEPES VVFSADSQYA YVSLQENNGV ARLNLADNSL
TFFGLGKTTH VFDTVNGGGF NPTRLLSLFR EPDGIAYIEI GGNGYFVTAD EGDTRDDIPP
GAISGRVRGG RTVSVFDATT GMLVGDTGNQ IDELAARYGL YPDSRSDRGG SEPEVLDAKV
FGGRAIVAVG LERARSVALV DVTNPAAPNV FLLLPAGTNP EGVKLFERNS ALYVLAANEV
SNDLTVARVP LGDLLFTQTY TEETPLALYD PFVIDPDSAP VTVTLTVDPA TAGTLNATTI
SGAPAAVNAA LANLTFTPAL NYAGPVTMTL SATDGQTETS GRILLNGIAI PPVTTASVSG
PTTPLCPADC FFGSATITLT TDEPATTQYR VNGGPWQTYT TPFAITSEGA NLVEFFSTDE
WGAVEEVKSI TVKVTTFPAT GILDTFNRAN GRLGRNWTGA TQLDQYRIAG NRVDVEQGGA
VLWKTQFGTD QEAFVTLTAI DPNSAHHTLL LKGRGTNATQ GAILVSYDAV NRQIVVEALQ
PGWGWRTVRV FTNVTLTNGD VLGARALADG SVRVYVNCTL IGVADTTTVV GNLYVNRGGR
IGLFYHQANN ALLDDFGGGN R
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