| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2815 |
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| Symbol | |
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| ID | 5209784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 3508126 |
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| End bp | 3509436 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640596414 |
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| Product | mandelate racemase/muconate lactonizing protein |
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| Protein accession | YP_001277136 |
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| Protein GI | 148656931 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.143363 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGATCA CCATTATCGG CGCCGAAGCG CGCGACATTC GGTTTCCCAC CTCCCGCACC
CTCGATGGTT CGGACGCGAT GAACCCCGAT CCCGACTACT CGGCGGCATA TGTTCTGCTG
CACACCAATG TTCCGGGTCT GACCGGGCAC GGGCTGACCT TCACCATTGG GCGCGGCAAT
GAGTTGTGTG TCGCTGCCTG CCACGCCTTG TTCCCCATGG TGTTGAACCG TTCCCTTGAG
TCGATCACCG CCGACATGGG CGCCTTCTGG CATATGATTA CCGGTGATAG CCAGTTGCGC
TGGATCGGTC CGGAGAAGGG AGTCATCCAT CTGGCGACCG CCGCAGTGGT CAATGCCGTC
TGGGACCTGT GGGCGAAGGT CGAGCAGAAG CCGCTCTGGA AGTTGTTATC CGATATGTCG
CCGGACGAAC TGGTACGCTG CATCGACTTC CGCTACATTT CCGACGCTCT GACACCCGAC
GAGGCGCGCG ATCTGCTGCG CCGTCAGGAA GCGACACGCG CCGAACGCGA GTCGGAGATG
CTGGCGCAGG GATTTCCTGC CTATACCACG TCTGCCGGAT GGATCGGCTA CTCCGACGAT
AAGGTTCGTC GGTTGTGCCA GGAAGCGATC AACGCTGGCT TTCAGCATAT CAAAATGAAG
GTCGGGCGCG ATCTCGACGC CGATCGCCGC CGCGCCCGCC TGATCCGCGA GATTATCGGA
CCTGATCGCA AACTGATGGC GGACGCCAAC CAGGTCTGGG ATGTGCCGCA GGCGATTGCC
TGGATGCACG ACCTCGCTGA ATTCGACTTC TGGTGGATCG AAGAGCCAAC CAGCCCTGAC
GACATCCTTG GTCACGCGGC GATCGCCCGC GCAGTCGCGC CGGTCGGCGT CGCCACCGGC
GAGCACGTGC AGAACCGCAT TATCTTCAAG CAACTGTTGC AGGCAAACGC CATCAGTTTC
TGTCAGATCG ACGCCTGCCG CCTTGGTGGG GTGAACGAGG TGCTGGCAGT CATCCTGATG
GCGGCGAAAT TCGGCGTGCC GGTCTGCCCG CACGCTGGCG GCGTCGGGTT GTGCGAATAT
GTGCAACATC TGTCGATCTG GGATTATATC TGCGTCTCCG GGTCGCTGGA GAATCGTGTG
ATTGAGTATG TCGATCACCT GCACGAACAT TTTCTCGATC CGGTCGTCAT TCGCAATGCC
CGTTACATGC CGCCGCAAAA GCCGGGGTAT AGCATCGAGA TGAAGCCCGA ATCACTGGCG
ATGTACGAAT ATCCGCACGG TCCGGCGTGG CGGTTGCACG TTGCACGTTG A
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| Protein sequence | MAITIIGAEA RDIRFPTSRT LDGSDAMNPD PDYSAAYVLL HTNVPGLTGH GLTFTIGRGN
ELCVAACHAL FPMVLNRSLE SITADMGAFW HMITGDSQLR WIGPEKGVIH LATAAVVNAV
WDLWAKVEQK PLWKLLSDMS PDELVRCIDF RYISDALTPD EARDLLRRQE ATRAERESEM
LAQGFPAYTT SAGWIGYSDD KVRRLCQEAI NAGFQHIKMK VGRDLDADRR RARLIREIIG
PDRKLMADAN QVWDVPQAIA WMHDLAEFDF WWIEEPTSPD DILGHAAIAR AVAPVGVATG
EHVQNRIIFK QLLQANAISF CQIDACRLGG VNEVLAVILM AAKFGVPVCP HAGGVGLCEY
VQHLSIWDYI CVSGSLENRV IEYVDHLHEH FLDPVVIRNA RYMPPQKPGY SIEMKPESLA
MYEYPHGPAW RLHVAR
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