Gene RoseRS_2812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2812 
Symbol 
ID5209781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp3504961 
End bp3506067 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content57% 
IMG OID640596411 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_001277133 
Protein GI148656928 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4608] ABC-type oligopeptide transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATACCG CAAAGAAAAA TGGCAAATCA GACGAGATAT TGCTCGAAGT CCGGGGTCTG 
AAGAAGCACT TCCCGATCCA CAGCGGTTTC CTGCGGCGCG TGTCCGGGTA TGTTAAAGCC
GTTGATGGGA TCGATTTCTA TATCAAGAAG GGCGAAACGC TCGGTCTTGT CGGTGAATCG
GGGTGTGGCA AGAGTACGAC CGGTCGCACG ATCCTGCGTC TCCTCGATCC GACGGCGGGT
GAGATCATTT TTGATGATCC GAATATCGGG AAGGTGGACC TGGCGAAACT GAGTCGCGCG
CAACTTAAGC GGGTGCGCCC GAATATGCAG ATTATTTTCC AGGACCCTTT CTCGTCGCTG
AATCCGCGCC TGACGGTTGG GCAGATTGTC GGCGAGCCGC TTGAAATCCA GAAGGTGGCA
TCCGGGCAGG CGCTCAGGGA TAGGGTAGCT GAGTTGCTTC AAGAGGTCGG TATTCGCCCG
GAGAATATGA CGCGCTATCC GCACGCTTTC TCCGGCGGTC AGCGTCAGCG TATCGGCATT
GCACGCGCTC TGGCGCTCAA TCCGAAACTG ATCGTCTGCG ATGAACCGGT CTCGGCGCTC
GATGTGTCGA TCCAAGCGCA GGTGCTCAAT CTGCTAGAAG ATTTGCAGGA GAAGTATGAT
CTGACCTATC TCTTCGTCGC TCACGATTTG AGCGTGGTTG AGCATATTTC GGATCGCGTG
GCGGTGATGT ACGTCGGTTA TATCGTCGAG ATGGCGAGCA CTGAAGATCT CTACTACCAT
CCCAAACATC CGTACACCGA GGCGCTGCTG GCCGCCATTC CGAAACCCGA TCCACGCAAG
CGGACACGAC CGATCAAACT TCCGGGCGAT GTGCCCAGTC CGGCAAATCC TCCGTCAGGG
TGCTACTTCC ATCCACGCTG TCGGTACGCT GAGGATATCT GCAAGGTCGA ACGACCGCCG
TTGCGCGACA TTGGCGGTGA GCACTGGGTT GCGTGCCACT TCGCCGAGCA GTTGCAGTTG
CAGGGTGTCA CGCGCCTGAA CGAAATCCCG TTGATCGAGC TTCCCAAACG CCAGCCGCCG
GTTCCGGCCG CGTCGCCTGC GTCGTAA
 
Protein sequence
MDTAKKNGKS DEILLEVRGL KKHFPIHSGF LRRVSGYVKA VDGIDFYIKK GETLGLVGES 
GCGKSTTGRT ILRLLDPTAG EIIFDDPNIG KVDLAKLSRA QLKRVRPNMQ IIFQDPFSSL
NPRLTVGQIV GEPLEIQKVA SGQALRDRVA ELLQEVGIRP ENMTRYPHAF SGGQRQRIGI
ARALALNPKL IVCDEPVSAL DVSIQAQVLN LLEDLQEKYD LTYLFVAHDL SVVEHISDRV
AVMYVGYIVE MASTEDLYYH PKHPYTEALL AAIPKPDPRK RTRPIKLPGD VPSPANPPSG
CYFHPRCRYA EDICKVERPP LRDIGGEHWV ACHFAEQLQL QGVTRLNEIP LIELPKRQPP
VPAASPAS