| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2808 |
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| Symbol | |
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| ID | 5209777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 3499400 |
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| End bp | 3501583 |
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| Gene Length | 2184 bp |
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| Protein Length | 727 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640596407 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001277129 |
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| Protein GI | 148656924 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCAACG CACGGAAGCT CAACCGGCGC ACATTCCTGC GCCTGTCAGC CGTCACGGCG
GCCAGCGCCG CTATCGCAGC CTGTGGCGGC CAGCCTGCCG CACCTCAACC GACCACTGCG
CCTGCCGCGC CTCAACCGAC CACTGCGCCC GCCGCGCCCG CTCCGACCAC TCCTCCCGCA
GCGACTGCCG TTCCTCCGGT GACAACCAAG TTCAAAGAAG CGCCGATGCT GGCGAAACTG
GTGCAGGAGG GCAAGTTGCC GCCGGTGGAT GAGCGCCTGC CGAAGAACCC CTACACGCCG
CCCCACTCCT GGCTTACCGT CGGCAAGTAT GGCGGTGTGC TGAAGAAGAC CTACAACAAC
AACTGGGGTA TTACCGGTTT CATCCACGAG ATGCAGTATG GCTCGTCGCC GCTGCGCTGG
CTCAAGGATG GACTGGCGAT CGGTCCCGGT TTTGTTGAAA GCTGGGAGTC GAATGCGGAC
GCGAGCAAGT GGACGTTCAA GATCCGCGAG GGGATCAAGT GGAGCGATGG TCAGCCGTTC
ACCACAAAGG ACATCATGTA CTGGTGGGAG TATACGGTTG GCGGTAACGG CAAGGAGAAG
GAGTTCCCCG CCGGCCTCAA GCCGATCAAC GCCCCGCCGG ATGAAGCGCG ATCCGGCACC
GGCACGCTGA TGACCCTCAA CGCACCGGAT GACTATACCT TCGAGATGGT CTTCGATGCA
CCGGCGCCAC TCACGGCGGA CCGCCTGGCG ATGTGGGTCA ATATGTTCAT CGGTCCGGCA
TGGGTGATGC CGCGCCACTA TATGGAACAG TTCAACCCGG TGCTCAACCC CGATAAGTAC
AAGGACTGGG AAGAGCATCA GCGCAAGTTC AACCACAACA ACCCCGACTG CCCGCGTCTG
ACCGGCTGGA AACTGGATGT GTTCGAGGAA GGCGTCCGCG CTGTCTGGTC GCGCAACCCC
TACTATTGGG CAGTCGATAA GGAAGGCAAT CAGTTGCCGT ATATCGATCA GATCATTGTG
ACGGCGGTCA AGGACAAGGA GATCGAGAAA CTGGCGTACA CGGAGGGACG CGCCGACCAC
GCGCACTTCC ACGGTCAGGG TCTGGCAGAT GTCCAGTCGC TACGCGATGC CGAGTCCAAG
AGCCAGCTCG AAGTTCGCTT CTGGGACTCT GGATCGGGCA CCGGTTCGCT CTACTTCTTC
AACATGGACT TCAAAGACCC GAAGATGCGC GCGGTGTTCC GCGATCCGAA GTTCCGCCAG
GCGCTGTCGC ACGCCTACAA CCGCGCCGAT GTGCAGAAGG CGGTCTACTT CGGGCTTGGC
GAGTTGACCA CCGGCACCTT CAGCCCGAAG GCGATCGAGT ACAACATCAA CGATCAGGGC
AAGCAGGTGT ACGCTGCATG GCGCGATAGC TACGTCAAGT ACGATCCGGC GCTGGCGGAG
AAGATTCTGG ATGAAGCAGG CTACAAGAAG GGTCCCGACG GCAAGCGCAC CATGCCGGAT
GGCAGCCCGC TGCAGATCCA GGTGACCTAT GGCGCCAACG CAACGCCTGG CGGCGAGCAC
CTGTCGAAGA ACGAGCGTCT GGTGCGCGAC TGGCAGGCGA TCGGCATTGA TGCAGTGCTG
ACGCCCATTC CAGGTGAGGG CGCCGATGAG AAATGGCGCG CTGGTGAAAT TCCGATGAAG
ACAGAGTGGG AAGTTGGCGA CGGCCCGAAC CACCTGGTCT TCCCATCGTG GCTGGTGGCG
GACGAGACCG AGCGCTGGGC GCCGCTGCAC GGGCGCGGGT ACACACTGCG CGGCACGGCG
TCGGAGAAGG AAGAACTGGA CAAGAATCCG TGGGATCGCA ACCCGCCGCG TATCAATCCC
ACCGATCCGG ATTATATGCC GGCGATTAAG AAACTCCACG ACCTGTTCGA CAAGAGCAAG
GTGGAACCGG ATGCCATGAA GCGCCACCAG CTCGTGTGGG ACATGATCAA GGTCCACATC
GAGGAGGGGC CGTTCTTCAC CGGAACGATC GCCAACCCGC CGCGCATTAT CCTGGTCAAG
AAGGGCCTGA TGAACGTACC AACCCGCGAT GACCTGTTGA AGGAAGGGTT GGGTGGCTTC
GTCAACCCGT GGATCATCCC GTCGCCGGCG GTCTATGACC CGGAGACCTG GTACTGGGAT
AACCCCGACG CGCACCAGGC GTAG
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| Protein sequence | MSNARKLNRR TFLRLSAVTA ASAAIAACGG QPAAPQPTTA PAAPQPTTAP AAPAPTTPPA
ATAVPPVTTK FKEAPMLAKL VQEGKLPPVD ERLPKNPYTP PHSWLTVGKY GGVLKKTYNN
NWGITGFIHE MQYGSSPLRW LKDGLAIGPG FVESWESNAD ASKWTFKIRE GIKWSDGQPF
TTKDIMYWWE YTVGGNGKEK EFPAGLKPIN APPDEARSGT GTLMTLNAPD DYTFEMVFDA
PAPLTADRLA MWVNMFIGPA WVMPRHYMEQ FNPVLNPDKY KDWEEHQRKF NHNNPDCPRL
TGWKLDVFEE GVRAVWSRNP YYWAVDKEGN QLPYIDQIIV TAVKDKEIEK LAYTEGRADH
AHFHGQGLAD VQSLRDAESK SQLEVRFWDS GSGTGSLYFF NMDFKDPKMR AVFRDPKFRQ
ALSHAYNRAD VQKAVYFGLG ELTTGTFSPK AIEYNINDQG KQVYAAWRDS YVKYDPALAE
KILDEAGYKK GPDGKRTMPD GSPLQIQVTY GANATPGGEH LSKNERLVRD WQAIGIDAVL
TPIPGEGADE KWRAGEIPMK TEWEVGDGPN HLVFPSWLVA DETERWAPLH GRGYTLRGTA
SEKEELDKNP WDRNPPRINP TDPDYMPAIK KLHDLFDKSK VEPDAMKRHQ LVWDMIKVHI
EEGPFFTGTI ANPPRIILVK KGLMNVPTRD DLLKEGLGGF VNPWIIPSPA VYDPETWYWD
NPDAHQA
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