| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2752 |
|---|
| Symbol | |
|---|
| ID | 5209721 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 3429569 |
|---|
| End bp | 3430375 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640596352 |
|---|
| Product | phosphoglycolate phosphatase |
|---|
| Protein accession | YP_001277074 |
|---|
| Protein GI | 148656869 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0647] Predicted sugar phosphatases of the HAD superfamily |
|---|
| TIGRFAM ID | [TIGR01452] phosphoglycolate/pyridoxal phosphate phosphatase family
[TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCACTCC CACGCTACAG CGCATACGTC TTCGATCTTG ATGGAACGAT TTACCTGGGT
GACGCGCTCC TGCCCGGCGC CGCCGAAACC ATCGCCCGTC TGCGCACTGG CGGATCGAAG
GTTCTGTTCC TCTCTAACAA TCCGACCCGC ACGCGCGCCC AATACGCGGC AAAATTGACC
GCGCTCGGCA TTCCGACAAC GCCGGACGAG GTGATCAACT CATCGTATGT GATGGTGCGC
TGGTTACGCG CAGAAGCGCC AGGGAGCCGG ATTTTCGTTA TTGGAGAGCA ACCGCTCTGC
GACGAACTGG CTGCCGCCGG TTTCGACCTG GCGACAGATG CTGGCGGTGT TCAATTCGTC
ATTGCATCAT TCGACCGCAC CTTCACCTAT CGCAAGTTGC AGATCGCATT CGATGCCATT
CGCGCCGGAG CGCGCTTCGT CGCCACGAAT CCCGACCGCT ACTGTCCGAC GCCAACCGGC
GGCGAACCTG ACGCTGCAGC AATCATTGCC GCCATTGAAG CGTGCACCTC ACATCCGGTC
GAAGTGGTGG TCGGCAAACC ATCGCCGATC ATGGCGCGAA CCGTTGCCGA TATCCTGCAA
CTGCCGCCTG AACGGTGCCT CATGGTTGGC GACCGACTCG AAACCGATAT TGTAATGGGG
CGCACCGCCG GGATGGCAAC GGCGCTGACC CTCACCGGCG CAACTGATCG CTGTGCGCTG
ATCAATTCGC CTGTTCAACC AGATTATGTC ATCGAGTCGG TTGGCGAACT GATACGGCAA
ACAGAGTATA ATGAGTTGCA GGCATGA
|
|---|
| Protein sequence | MPLPRYSAYV FDLDGTIYLG DALLPGAAET IARLRTGGSK VLFLSNNPTR TRAQYAAKLT
ALGIPTTPDE VINSSYVMVR WLRAEAPGSR IFVIGEQPLC DELAAAGFDL ATDAGGVQFV
IASFDRTFTY RKLQIAFDAI RAGARFVATN PDRYCPTPTG GEPDAAAIIA AIEACTSHPV
EVVVGKPSPI MARTVADILQ LPPERCLMVG DRLETDIVMG RTAGMATALT LTGATDRCAL
INSPVQPDYV IESVGELIRQ TEYNELQA
|
|---|
| |