| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2733 |
|---|
| Symbol | |
|---|
| ID | 5209702 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 3399003 |
|---|
| End bp | 3399500 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640596333 |
|---|
| Product | hydrogenase maturation protease |
|---|
| Protein accession | YP_001277055 |
|---|
| Protein GI | 148656850 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0680] Ni,Fe-hydrogenase maturation factor |
|---|
| TIGRFAM ID | [TIGR00072] hydrogenase maturation protease
[TIGR00140] hydrogenase expression/formation protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCCGA TACTTGTGAT GGGATTGGGG AACGTACTCC TGCAGGATGA GGGGTTAGGA
GTGCGTGCAT TGCGTCGTCT GACGGAACGC TACATCCTGC CCGACGACGT CGAGGCTATC
GATGCAGGTG CGCTTGGATT ATCACTCCTC TCGTTCCTCG AAGGCGTCGA GGATGTGCTG
ATCATCGACG CCATTCATCG TGGTCAACGT CCTGGATCGC TCATACGCCT CGAAGGGGAG
GAGGTTGCCT GGGCAGAAAC CATGCACCTG TTGCCGCAGG ATGTCCGTCT GCACGAACTG
ATCGCCCTTC GTGGCGCAGC AGGTTCATCA CCGCAGCGGG TCGTGCTGTG GGGAATGGAA
CCGGGAACCT CTGAACCAGG GCTGGAACTG ACCCCTGAGT GTGAAGCCCA TCTTGATGAT
CTCGTGGATG CCGTCGTGCG CGAACTGCGC GCCTGGGGCG CCGATGTGCG ACCGATCCCG
GAGCGCTCCG TGAAGTAG
|
|---|
| Protein sequence | MAPILVMGLG NVLLQDEGLG VRALRRLTER YILPDDVEAI DAGALGLSLL SFLEGVEDVL
IIDAIHRGQR PGSLIRLEGE EVAWAETMHL LPQDVRLHEL IALRGAAGSS PQRVVLWGME
PGTSEPGLEL TPECEAHLDD LVDAVVRELR AWGADVRPIP ERSVK
|
|---|
| |