| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2730 |
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| Symbol | |
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| ID | 5209699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 3392799 |
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| End bp | 3394082 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640596330 |
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| Product | L-rhamnose isomerase |
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| Protein accession | YP_001277052 |
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| Protein GI | 148656847 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4806] L-rhamnose isomerase |
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| TIGRFAM ID | [TIGR01748] L-rhamnose isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.6873 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATTCA CAGCGCCGAC TCCCGCACAG ATTGAAGCCG CTTACGCCGC CGCCCGTGAA
CGGTATGCGG CGCTTGGCGT CGATACCGAA GCGGCGCTGG CGACCCTGGC GACGATCAGC
CTGAGCCTGC ACTGCTGGCA GGGGGATGAT GTCGCCGGTT TCGAGAATCC CGGAGGACCG
CTCGAAGGCG GAATTGCTGC GACCGGTAAC TATCCGGGCA AGGCGCGCAA CGCCGACGAA
TTGCGCAGCG ATCTCGATAT GGTGTACCGC TTGTTACCCG GTCGTCACCG TCTCAACCTC
CACGCCATCT ATGCCGAAAC GGGCGGAGTT AAGGTCGGGC GCGACGAACT GCGCCCTGAG
CATTTTGCAG CCTGGCTCGA CTGGGCAAAA GCGGGTGGGC ACGGGATCGA CTTTAATCCG
ACATGCTTTT CGCATCCACT GGCAGCCGAT GGTTTGACCC TCTCCCATCC CGATCCGGCG
ATCCGCCGCT TCTGGATCAA CCACTGCATC GCATGTCGTC GCATCGGCGC CCACTTCGGG
CAGGCGCTGG GCACGCCATG CATCACAAAC ATCTGGATTC CAGACGGCAT GAAGGATAAC
CCGGTTGATC GGTTGGGACC ACGCGAGCGT CTGCGCGAAT CACTCGATGC CATCCTGGCT
GAACCGCTCG ATCCGGCGCA TAACCGTGAC GCGGTGGAAG CCAAACTCTT CGGCATTGGC
TCCGAAAGCT ACGTCGTTGG CTCGCACGAA TTCTACCTGG GGTATGCGGT CCGTCGCCCT
GGCGTGATCC TTTGCCTCGA CACGGGGCAT TTTCACCCGA CCGAACTGGT CTCGGACAAA
ATTTCGTCCG TGCTGCTGTA TGTAGACGAC ATCCTGCTGC ATGTCAGTCG CGGCGTGCGC
TGGGACAGTG ATCACGTCGT GACGTTGAGT GACGAGACGC ACGCCATCAT GCAGGAGGTG
GTGCGTGGCG GCTTTCTGAG CCGCACCCAC ATCGGGCTGG ATTTCTTCGA TGCCAGTATC
AATCGGGTTG CTGCCTGGAC AATCGGCGCC CGCAATGCCC TGCGCGCGCT GTTGATTGCG
CTCCTCGAAC CGACCGAACG CCTGCGCGAA CTGGAACGCG CCGGGGATTT CACGGCGCGC
CTCGCCCTGC TCGAAGAGTT GAAGGGCATG CCGTGGGGGG CAGTGTGGGA TGCCTGCTGC
TACCGCCATG ACGTGCCGGT GGGCGCCAGT TTCCTGAATG AGGTGCGTCG CTATGAAACC
GACGTGCTCG CGGCGCGTAC CTGA
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| Protein sequence | MTFTAPTPAQ IEAAYAAARE RYAALGVDTE AALATLATIS LSLHCWQGDD VAGFENPGGP
LEGGIAATGN YPGKARNADE LRSDLDMVYR LLPGRHRLNL HAIYAETGGV KVGRDELRPE
HFAAWLDWAK AGGHGIDFNP TCFSHPLAAD GLTLSHPDPA IRRFWINHCI ACRRIGAHFG
QALGTPCITN IWIPDGMKDN PVDRLGPRER LRESLDAILA EPLDPAHNRD AVEAKLFGIG
SESYVVGSHE FYLGYAVRRP GVILCLDTGH FHPTELVSDK ISSVLLYVDD ILLHVSRGVR
WDSDHVVTLS DETHAIMQEV VRGGFLSRTH IGLDFFDASI NRVAAWTIGA RNALRALLIA
LLEPTERLRE LERAGDFTAR LALLEELKGM PWGAVWDACC YRHDVPVGAS FLNEVRRYET
DVLAART
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