| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2704 |
|---|
| Symbol | |
|---|
| ID | 5209673 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 3359479 |
|---|
| End bp | 3362034 |
|---|
| Gene Length | 2556 bp |
|---|
| Protein Length | 851 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640596306 |
|---|
| Product | von Willebrand factor, type A |
|---|
| Protein accession | YP_001277028 |
|---|
| Protein GI | 148656823 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1240] Mg-chelatase subunit ChlD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCTTC GCAATCCACA GTTTCTGGCG TTCCTGATGC TCGTGCCCCT GATCATTGGC
GGCTGGCTCT GGCGACGCGG TCGCCTGCCG GCAATGGCGC TCGTGCTGCG GGTTGCCATT
GTCACGCTCA TTATCGTTGC ACTGGCGAAT CCCGTTATGC TGCACGGGCG AATTGAGACC
GCCGCTGCAC CGCTCATCGT CGTGCTGGTT GACCAATCGG ACAGCCTGAC CGATCAGGGG
AAGGCGACAC TCCGTGCGCG TGCAGCGGCG CTTGCCGCAG GTAGCAGCAC CCCCGTGCAG
ATTATCACCT TTGGTGCGAC CGTGGCGGCA GAAGGCGGGA CGTTACGCAG CGATCAGACC
GACATCGCGG CTGCACTGCG TGCAGCACGC GGGTTGATCG GCGCCAGTGG CGGTCGGGTG
GTGCTGCTCT CCGACGGTCT TCAGACCAGG GGGGACGCAC TCGCCGAAGC GCGGGCGCTG
GCGCTTGCCG GTATCCCGGT CGATACGGAA CAGTATCAGG CGCCAGCATT GTCCGAGTTC
TGGATTGCAA CGGTTGAGAC GCCAGCCACC TTGCGCGAAG GGGAGGAGTT TACCGCCCGA
ATCGTGATGG TCAGCACCGT TGCTACCGGT GTGCAACTGG AGATCACCGC TGGCAATGAG
CGTATGGTGA CGCAGCAGGT GCGTCTATCG CCCGGCGAAA ACACCTACCT GTACACCGGT
CGCGCCGGTG AGCCGGGCAT TCTGCGCCTC CAGGCGACGA TCAGCGGTCA GCCCGACACG
CTTGCGCGCA ACAATCGCGC CGGTGCAGCT ATGCTCGTTG CCCCAATGCC ACGTATTTTG
CTGGTGGAAG GATCAGACGG CGCTATCAGC GCACCATTGC GAGGCGCGCT CCGTGAAGCA
GGCGTCATTG CGGATGTAGC CGATCCGACG GCGCTCCCCG CCCAGATCTC GGCGCTCGGT
CTCTACGAAG GAATTGTACT GATCGACGTG CCTGCAAGCG CGCTGACCTT CGACCAGATG
GCGACGTTGC GCGAATTTGT CCGCAGCGAA GGGCGCGGCT TACTGGCGAT TGGCGGACGA
TCAAGTTTTA CGCTCGGCGC CTACAAGAAC ACTCCCCTGG AAGAAACACT GCCGGTCGAA
ATGACCCCGC CCCCACGTCC AGAACGCTCG GATACGACCC TGCTGTTGAT CATCGATCAA
TCTGCCAGCA TGGGACCCGA AACCGGCATC TCCAAATTCA CGATGGCGAA AGAAGCCGCC
ATCATGGCGA CCGAGTCGCT CCGCCAGGAG GATCGCATCG GCGTGCTGGC ATTCGATGTC
TCGACCCGCT GGGTGGTTGA TTTTCAGCCG GTCGGCGTTG GTTTGAGCCT GGCTGATGTG
CAGCGCCGCA TCAGCACGCT GCCGCTTGGC GGCGGAACCG ACATCTACAA CGCACTCCAG
GAGGGATTGC CAGCACTGGC GCAGCAACCC GGACGGGTGC GCCACGCAGT GCTGCTCACC
GATGGTCGTT CGTTCACCGA CGACCGACAG GCATATCGGA TGCTGCTCGA AGAAGCGCGC
AGCCAGAATA TCACCCTCTC GACGATTGCC ATCGGCACAG ACGCCGACAT CAATCTGCTC
CAGGAACTGG CGCGCTGGGG GGCGGGGCGG TATCACTACG CCGCCGAACC AAACGATATT
CCGCGCCTGA CGCTGCTCGA GAGCGAAATT GTGCGCACAG AACCGCAGGT TGAGGGCGAT
TTCCGCGCCG AGCAGACCGC TCCGCATCCC ATGTTGCGCG ACTTCGCGCC GGAGCAGATC
CCCGGTTTGA AAGGATATGT GGCCACGCTT CTGAAGCCCG GCGCCGATCT GGTGCTCCGT
TCCCCTGATG GCGACCCGGT GCTCGCTGTC TGGCAGTATG GGCTTGGGCG CGCCGCTGCG
TGGACGCCTG GTGCAGAAGC GCCATGGGCT GCCGACTGGT CAAACTGGCC CGATTACGGT
CGTTTCTGGG CGCAACTGAT TCGCTACACT CTCCCTGAGC CGGATAGCGG TCCGCTTCAA
GTGCGCGCCA TCCGTGACGG CGATAGTGTG CGCATCGTCG CCGACTCCGT CGCACCGGGC
GGCAGACCGC TAGACCTGGC GGATACCCAG GCGACGATCG TGCTGCCGGA TGGTTCATCC
CGACTGATTA CACTCCGTCA GACAGCGCCC GGACGCTACG AACAGGCGTT GACCCTGACG
ACCGACGGTT CGTATGCAAT CGAAGTGCGC CAGCAAAAGG GGAATGAGGT GCGCTCGGCG
CAGATCGGCT ATGTGCAACG CTACCCCGAT GAATACCTGC CTCCCGCCGA TCCGCAGGCC
GGCGCGCGGC TGTTGAACGA CATCAGCGCC ATCACTGGCG GAACAGCGCT CCGCGGCGGA
CCGCTCGTAA CGCCGGGCGT CGTTCCTCTT AGCGCTGAAC GGGCGCCGGA TACCGGGCTG
TGGCCCTGGT TGATCGGTCT TGCGGCGTTT CTCTGGATCA TTGAGATCGC GCTACGGCGT
GGGTGGTTAC GACTACCGCA GCGCTTCACC CGCTGA
|
|---|
| Protein sequence | MILRNPQFLA FLMLVPLIIG GWLWRRGRLP AMALVLRVAI VTLIIVALAN PVMLHGRIET
AAAPLIVVLV DQSDSLTDQG KATLRARAAA LAAGSSTPVQ IITFGATVAA EGGTLRSDQT
DIAAALRAAR GLIGASGGRV VLLSDGLQTR GDALAEARAL ALAGIPVDTE QYQAPALSEF
WIATVETPAT LREGEEFTAR IVMVSTVATG VQLEITAGNE RMVTQQVRLS PGENTYLYTG
RAGEPGILRL QATISGQPDT LARNNRAGAA MLVAPMPRIL LVEGSDGAIS APLRGALREA
GVIADVADPT ALPAQISALG LYEGIVLIDV PASALTFDQM ATLREFVRSE GRGLLAIGGR
SSFTLGAYKN TPLEETLPVE MTPPPRPERS DTTLLLIIDQ SASMGPETGI SKFTMAKEAA
IMATESLRQE DRIGVLAFDV STRWVVDFQP VGVGLSLADV QRRISTLPLG GGTDIYNALQ
EGLPALAQQP GRVRHAVLLT DGRSFTDDRQ AYRMLLEEAR SQNITLSTIA IGTDADINLL
QELARWGAGR YHYAAEPNDI PRLTLLESEI VRTEPQVEGD FRAEQTAPHP MLRDFAPEQI
PGLKGYVATL LKPGADLVLR SPDGDPVLAV WQYGLGRAAA WTPGAEAPWA ADWSNWPDYG
RFWAQLIRYT LPEPDSGPLQ VRAIRDGDSV RIVADSVAPG GRPLDLADTQ ATIVLPDGSS
RLITLRQTAP GRYEQALTLT TDGSYAIEVR QQKGNEVRSA QIGYVQRYPD EYLPPADPQA
GARLLNDISA ITGGTALRGG PLVTPGVVPL SAERAPDTGL WPWLIGLAAF LWIIEIALRR
GWLRLPQRFT R
|
|---|
| |