Gene RoseRS_2702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2702 
Symbol 
ID5209671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp3356710 
End bp3357633 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content58% 
IMG OID640596304 
Producthypothetical protein 
Protein accessionYP_001277026 
Protein GI148656821 
COG category[R] General function prediction only 
COG ID[COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGTTCG GGAATATTTT CAGCCCTAAA CCGCAGGCGG AGATACCGCC GCTGTTCAAT 
GAAGCCTTTC TACGCCGCCT GGAACGGCTG AGCCTGCAGG CGCAGCGGAC CCTGCGCGGT
CGCCCATCTG GCGGCGCACA TCTCAGCCAT CGTCTGCTGC CCACGTCTAT CTTTAGCGAT
CATCGCCCGT ACAGTGTCGG TGACGATTAT CGCTATGTTG ACTGGAATGT GTATGCGCAC
CAGGATGCAC TCTTCGTCAA ACTGGGCGAG ATCGAACAGG ATGTTACTAT TCATCTGCTG
CTGGACGCAT CGCGCTCGAT GGCATGGGGG TCTCCTGCCA AACTGCGCGC TGCGCAATTG
ATTGCCGGAA CGCTTGGGTA TCTGGCGCTG GCGCACAATG ATCGGCTTCA TGTGACGTCA
TTCGATGCCG CAGTGCGCCG TGAGTTCGGA CCGGCACAGG GAAAATCGCG CCTGATTGAG
ATGTTACGGT TCATCGAGCA GGTGCAACCG GGCGGCGAAA CCAACCTCAG ATCGGCGCTC
GAAACGTATG CGCGCCACCA TCCACGCGGA GGGTTGCTGG TCGTCTGTTC CGATCTGCTT
GCGCCTGAAG GGCTTGAGGA GGGATTACGC GCGTACCCAC CACCGACATG GCAGACACTC
GTGATCCATC TTCTCGATCC GCGCGAACTG AACCCTGAAC GTCTCGGTCC CATCGAGCTT
GAAGATGTTG AGACGGGTAA ACTCCTGCCA TTGATTATTG ATGATGAGAC AATTGCACAC
TACCGTCGTA ATCTTGCCGC CTGGCAGCGG ACGATCGAAT CGATCTGCGG GCGACGAGGC
GCAACATATG CGCGTGTGCT CAGCACGTGG CCGCTCGAGC GACAGATTAT TCCATATCTG
CGCGCACGCC AGATACTGAC ATAG
 
Protein sequence
MWFGNIFSPK PQAEIPPLFN EAFLRRLERL SLQAQRTLRG RPSGGAHLSH RLLPTSIFSD 
HRPYSVGDDY RYVDWNVYAH QDALFVKLGE IEQDVTIHLL LDASRSMAWG SPAKLRAAQL
IAGTLGYLAL AHNDRLHVTS FDAAVRREFG PAQGKSRLIE MLRFIEQVQP GGETNLRSAL
ETYARHHPRG GLLVVCSDLL APEGLEEGLR AYPPPTWQTL VIHLLDPREL NPERLGPIEL
EDVETGKLLP LIIDDETIAH YRRNLAAWQR TIESICGRRG ATYARVLSTW PLERQIIPYL
RARQILT