Gene RoseRS_2693 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2693 
Symbol 
ID5209662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp3347533 
End bp3348186 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content65% 
IMG OID640596295 
Productphosphoribosylglycinamide formyltransferase 
Protein accessionYP_001277017 
Protein GI148656812 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0299] Folate-dependent phosphoribosylglycinamide formyltransferase PurN 
TIGRFAM ID[TIGR00639] phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.467272 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCTT CGGCGCAACC CTACCAGATT GCTGTGCTGA TCTCCGGGAG CGGGTCGAAC 
CTTCAGGCGC TGCTGGACGC GCAGCAGGCG GGAGACCTCG GCAATGCGGA GATTGTCCTG
GTTGTCAGCG ACCGCGCCGA CGCCTACGGG TTGCAGCGCG CTCTGAAGCG CCGCGTCGCC
GCAGCCTTCA TACCGCTGCG GCATCCGCGC GATCCTGCTG CGCGCGCCGC CTGGGAACGT
CGCCTGGCGG ACGTTGTCGC CGCATTTGCG CCAGACCTGA TCGTCCTTGC CGGTTTTATG
CGCGTGCTCT CACCGGTATT TCTGGATCGA TTTCCTGACC GGGTCATCAA TCAACATCCG
GCGCTGCTCC CCGACGACGG CGGCGATACC TTTGTCACAT CGCGCGGCAT CGTTATTCCA
GCGCTCCGTG GCGCACACGT CGTTGCTGAT GCGATCCGGC TTGGTCTGCC GGTCACCGGG
TGCACCATTC ATCGGGTCAC TCCGGCGGTT GATGATGGAC CGGTGCTGGC GCGCGCCGAA
GTGCCGGTGC TGCCCGGTGA TGATGAAGCC ACGCTTCACG AACGCATCAA AGACGTGGAG
CACCGTCTGA TCGTCGAGGT TGTGGCGCGG TTGGTGCGGG AAGGGCGACA ATGA
 
Protein sequence
MSASAQPYQI AVLISGSGSN LQALLDAQQA GDLGNAEIVL VVSDRADAYG LQRALKRRVA 
AAFIPLRHPR DPAARAAWER RLADVVAAFA PDLIVLAGFM RVLSPVFLDR FPDRVINQHP
ALLPDDGGDT FVTSRGIVIP ALRGAHVVAD AIRLGLPVTG CTIHRVTPAV DDGPVLARAE
VPVLPGDDEA TLHERIKDVE HRLIVEVVAR LVREGRQ