| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2680 |
|---|
| Symbol | |
|---|
| ID | 5209649 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 3331352 |
|---|
| End bp | 3332515 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640596282 |
|---|
| Product | oxidoreductase domain-containing protein |
|---|
| Protein accession | YP_001277004 |
|---|
| Protein GI | 148656799 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGGTATC ATACAGCGGC ACGCCTTTCA TTGGAAGAGT CGCGTATGAC AACCCATCCC
CCGCTCCCTG ATCTCCGCTT TGGCATGATC GGCAGCGCCG CCGGTATTGC CGCGAGCCAC
GTGAAAGCGC TTACCCAACT TCCAGGTGCA TCGATTGTCG GAATGGCGGA TGTCGCCGTC
GAACGCGGCG AAGCCCGCGC CAGGGAGGTC GGGTGCCCAT TCTTTGCCGA CTACCGCGCA
ATGCTCGACA CTGTTCGTCC CGATGTTGCG GTTATCTGCG CGCCGCATCC GTTCCATGCC
GCGCTGGCGA TCGACTGCCT GGAAGCCGGC GCGCACGTGC TGGTCGAGAA ACCGCTTGCG
GTCAGCGTGT CCGAAGCGGA TGCAATGATC GCTGCCGCCG ACCGCGCCGG GCGCCTGCTG
GCGGTTTGCT TCCAGCAACG GTTTCGTCCG GTTGTTGAAC ATGCCCGTGC TCTGATCGAA
TCCGGCGCGA TCGGCGATAT TGTGCGCGTG CTCTGCGTCG AACCATGGTT TCGCACGCAG
TTCTACTACG ACTCGGCAGC CTGGCGCGGT ACGTGGCGCG GGGAAGGCGG CGGGGTTCTG
ATGAATCAGG GTCCGCATCC GCTCGACCTG CTCTGCCATC TGGTCGGTGC ACCGGCGAAG
GTGTGGGGTT GGGTGCGGAC GCAGGGTCAT GCCATCGAGT GCGAAGATGT CGCCCACGCG
CTGCTGGAGT ATCCCAACGG CGCCCCTGGC TACATCTATT TCAGCACCGT CGAAGCAAGT
CCCGAACGGC GCATGGAGAT CGTTGGCGAC CGCGGCGCGC TCGTGATCGT CTTCGATCAT
CTGACGATCC ACCGCTTTGC CATGCCGCTG AGTGAGTACC GCGCAACGGC GCCTGAGATG
TGGGGTCAAC CGCAGATCCA CACCGAGACG CTCCACCTGC CCGGCGATGG CGGCGGACAC
CTTGCGGTCT ATCTCGATCT GGCGCAGTCA ATCGCGGAGG GGCGTCGTCC GCGTTGCGAT
GCGCGCCAGG CGCGGATGTC GCTCGAACTG GCGAATGCCG TCATTCTGTC CGGCGTTACC
GGGCAGGCGG TTTCACTGCC CCTCGACGGT CAGGCGTATG ATGCGTTGCT CGATGATCTG
AAATCGGGGA GGCGAACGCT GTGA
|
|---|
| Protein sequence | MGYHTAARLS LEESRMTTHP PLPDLRFGMI GSAAGIAASH VKALTQLPGA SIVGMADVAV
ERGEARAREV GCPFFADYRA MLDTVRPDVA VICAPHPFHA ALAIDCLEAG AHVLVEKPLA
VSVSEADAMI AAADRAGRLL AVCFQQRFRP VVEHARALIE SGAIGDIVRV LCVEPWFRTQ
FYYDSAAWRG TWRGEGGGVL MNQGPHPLDL LCHLVGAPAK VWGWVRTQGH AIECEDVAHA
LLEYPNGAPG YIYFSTVEAS PERRMEIVGD RGALVIVFDH LTIHRFAMPL SEYRATAPEM
WGQPQIHTET LHLPGDGGGH LAVYLDLAQS IAEGRRPRCD ARQARMSLEL ANAVILSGVT
GQAVSLPLDG QAYDALLDDL KSGRRTL
|
|---|
| |