Gene RoseRS_2678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2678 
Symbol 
ID5209647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp3328589 
End bp3329077 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content58% 
IMG OID640596280 
Productphosphodiesterase 
Protein accessionYP_001277002 
Protein GI148656797 
COG category[R] General function prediction only 
COG ID[COG0622] Predicted phosphoesterase 
TIGRFAM ID[TIGR00040] phosphoesterase, MJ0936 family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATTG CCATCGTATC GGATATTCAC GACCATATTT CGCGGCTGGC GACAGCATTG 
GAACGGGTAC GCGGCGCGGA TACGCTGATC TGTTGCGGCG ATCTCTGTTC GCCATTCATT
ATGCGGCAGT TAGGCGAAGG ATTTGCCGGT CCGATCCATA TCGTCTTTGG CAACAATGAC
GGCGATCTGT TTCGTCTGAC CGTCGCGGCG GCGAACTTCG CGCAGATCAC GCTCCACGGC
GCCTTTGCCG ATCTCGATCT CAATGGACTG CGGGTGGCTG TGACGCACTA CCCGGAGATA
GCGATGCCGC TGCTCGAAAG TGGAAGGTAT GGTCTGATAT GCTGCGGACA CAATCACCGG
TACAGCGTGG TGCAGCGCGG TGCGGTCACG CTGGTTAATC CGGGCGAAGT GATGGGTGAA
CTGTACGGCG ACGCGACCTG CGCCGTATAT GACAGCGACA CCGGCGACGT CACACGGTAT
GATCTTTAG
 
Protein sequence
MRIAIVSDIH DHISRLATAL ERVRGADTLI CCGDLCSPFI MRQLGEGFAG PIHIVFGNND 
GDLFRLTVAA ANFAQITLHG AFADLDLNGL RVAVTHYPEI AMPLLESGRY GLICCGHNHR
YSVVQRGAVT LVNPGEVMGE LYGDATCAVY DSDTGDVTRY DL