Gene RoseRS_2672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2672 
Symbol 
ID5209641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp3318633 
End bp3319709 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content62% 
IMG OID640596274 
ProductNADH-ubiquinone oxidoreductase, chain 49kDa 
Protein accessionYP_001276996 
Protein GI148656791 
COG category[C] Energy production and conversion 
COG ID[COG3261] Ni,Fe-hydrogenase III large subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCATACT CGCTGGCGCT GGGACCTTTC CACCCTGCAT GGCTCGGTCC GCAGCGCTTC 
ATTCTGCACA TTGCCGACGA TCGCGTCGTC GATGTCGAGT ATCAGAACGG GTTCAACGAA
CGCGGTTGCG CCGAGCGATT ACCACGATTG CCGCTGCCCG ATGCGCTGCA CCTGGTTGCG
CGGATCTGCG GTGAGTGTTC CTTTGCCCAT TCCCTGGCGT TCTGTCAGGC GATCGAGCAG
GTACAACGGC GAAAAGTGGG CGCGCGCGCC GCGCTGCTCC GGGTTGCAAT CGCCGAGTTG
GAACGGACGG CGGCCCATCT CTATACAGCG CGCGCCGTGC TGGACGCAAT CGGCATGGAG
CAGCGCGGCG CAATCCTCGA TCATTTTTGC CAGCAGTCCC GTGATATGCT GGCGCTGGTC
ACCGGCGGTC GCATTCCGCC GCCTGTGTGT GCACCGGGTG GTCTGTTGCG CGACCTGACG
CCGGTTGAGC GGCAAGAGGT ACTGGCGATG TTGCCGGGAA TGAGCGCCGA CCTCTATCGC
TTCATTGATC GCCTCATCGA TCAGCGCTTC TTGCTTATGC GCACCGTCGA GGTTGGGGTG
TTGCCGCGCG CGGCAGCCGA GCAGTTTGGC GTGCGCGGTC CACTGGCGCG CGCTTCCGGC
ATCCGTCGCG ATGTCCGAGT CGATCAGCCC TACGCAGCAT ACAGCATGCT CGATGTTCAA
CCGATCATTC AGGAAGGCGG CGATGTGTAC GCGCGCCTGC TGTTACTCTT GCTGGAAGCG
TATGAGGGTG TCAAACTCGT CGAATCTGCA CTGCAACGCC TCCCTGAAGA AGACCCGATC
GTCGAACTGC CGCACGAATT GCCGCGTGGT CAGGCCTCCT CGGTTGTTGA GGGTCCTCGA
GGCGCCATTC GTTATACACT CGAGAGCGAT GGCGTGCGAT TGACCCGGGT GCAGATTGAT
ACGCCGCGTC AGTGCGATCG ACTGCTGGCG CGCACCCTGC TGAGCCGGGC GCAACTGGAT
GATGTGATGG CAATTCTGGC GTCGCTCGCA GTGTGTGTCG CCTGCGCCGA GCAATAG
 
Protein sequence
MSYSLALGPF HPAWLGPQRF ILHIADDRVV DVEYQNGFNE RGCAERLPRL PLPDALHLVA 
RICGECSFAH SLAFCQAIEQ VQRRKVGARA ALLRVAIAEL ERTAAHLYTA RAVLDAIGME
QRGAILDHFC QQSRDMLALV TGGRIPPPVC APGGLLRDLT PVERQEVLAM LPGMSADLYR
FIDRLIDQRF LLMRTVEVGV LPRAAAEQFG VRGPLARASG IRRDVRVDQP YAAYSMLDVQ
PIIQEGGDVY ARLLLLLLEA YEGVKLVESA LQRLPEEDPI VELPHELPRG QASSVVEGPR
GAIRYTLESD GVRLTRVQID TPRQCDRLLA RTLLSRAQLD DVMAILASLA VCVACAEQ