Gene RoseRS_2641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2641 
Symbol 
ID5209610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp3276139 
End bp3278640 
Gene Length2502 bp 
Protein Length833 aa 
Translation table11 
GC content64% 
IMG OID640596243 
Productlytic transglycosylase, catalytic 
Protein accessionYP_001276965 
Protein GI148656760 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTGTC TTTGGAGCGT GCTGGTGATC GCACTGTCGC TTATCGCCTG TACGCCGGAA 
ACTGCAACAA ACGTTCCGTC TCCTTCCCTG ATCGAAGCGG TAACGCCGGT TGGAACTCAA
GGTACGCCGG AAACCGAAAC AAACGTTCCG TCTCCTCCCG ATGCCTCCCT GTCCACTTCG
CTGCAGTCGC GTCCCGACAT GGCATCGCCG GAGGCGCCGG GAACACCGCA ACCTGATTCG
CCACCCGCTC TCCCCGGAGG TTCGTCTTCC TCTGTCGCCT CGCCCGATGA GCTGCTTGCG
CGTGGGCTGG AGCGACGCGA AGCCGGCGAC TACGATGCGG CTGCTGAGGC GTTCTTTGCA
GCTGCCAATG CCGCGCGGGG AACGCCGACG GGACGTGCCG CGCGCTTCTA CCTGGCAGAA
AGTTTTGCCC TCCGCGAACG CTGGACATCG GCTGTCGAAG CGCTGAATGC GTTTGTTGCC
GACGGAATCC AGGACGATCT GACAGCACGG GCATGGTTCT GGATTGCGCG CGGGCATGAA
GAAGCCGGTT CGCACGCTGC GGCAATCGCG GCGTATGAGC AGTTCCGCTC CTTCGCCACA
CCTGCTGAGA CATATGCTCG CCTGCGACAG GCCGCTCAGG AACGCGCCGT TGGTCGCCTC
GACGCCGCTG CCGCGAACTA TGAGGCGGTT GCGCGCAGCG ATCTTGCGCG CAGTCAGCGC
GCTGCGGCAT ATGAGGCGGC AATTCAGGTA CGCCGTGACC TGAGACAGAT CGATGGTGCG
TTGCAGCTGG CAAACGAACT GCTAACGCTG GCGGAGCAAC CGGCATACCG CGCCCGCCTG
CTGATCGAAC TCGCCGATCT GCCGCGCAGC CAGGGAGACC TGGCGACAGC GCGATCCTGG
CTGTTCGAGG GTCTCACACG CGCGCCGGGG TTGCCGGTGT CCCTGGCGAT GGTGGATCGG
CTCCGCACTG ATCCTGAGAT TGCCATCCCG CCTGATCTGG CAGCCCGCGT CTACGAGGCG
CATAGCCGCT GGTCTGACGC AGTTGCTGCG CTCGATGCCG CACTCGCCAC GGCGGACGAC
TCACAGCGCG CCGATCTGCT CCGACGACGG GCCCTGGCGC TGCGTGGTCT GGGAGATTTT
CCCGCAGCAC TGACAGGGTT TGATGCCGCA ATTGCTGCAG CTGGCGAAAG CGACGCTGGC
ATTCAGGCGC GCCTCGACCG GATTCAGACG GTCGGGCAGA GTGGCGCCAC CGAAGCGGCA
ATTCAGGGGT ACCGTGATTT TGCCGCGACA TTCCCCAATG ATTCCCGCGC TCCAGAGGCG
TTGCGTCGCG CTGCGGCGTT GCTCGACCGA CTCGGTGATG GAGAAGCGGC GGCGCAGCAG
CGTATCGACC TGGGTCGGCG GTATCCGTCT CTGCCGCTGG CACAGGAAGC CTGGTTTGCG
GGCGGGCTGC ATCTGTTCGT GTCTGGTCAG GCGGTGCAGG CGCGCCAGGT GTGGGACGAA
CTGGCTGCCG CCGCCACAGG CGCAGCGGCG CTGCGAGCGC GGTACTGGGC AGGGCGTGCA
GCGCTTGCCG CGGGCAACGG GGAAGAAGGG CGCGCATTGC TGGATCAGGT AATTGCGTCT
GCACCCGATT CCTACTTCGC TGCACGCGCC CGCGTATTGC TCAATCGTCG GGAAACGGGC
GCGATTGCGC CTGATGACCC GATGAGTGCG GATGACTGGC GTTCCATCGA GGAGTGGCTT
GCCACATGGG CTGGCGAACC GCCGCCCGAC ACAACCAATC CGGCTGATGA CCCCACAATC
CGGCGCGCGC GCGAACTCGA CGCGCTTCGT CTGCGCGTCG AGGCGATGGC GGAATGGTCG
GCGGCGCTGG CAATACGCAA TGACAACCCA TATGCGCTCT ACCTGCTGGC GCGCTATGCG
CATGAGCAGG GCGCTGCCAG CGTTACACTG CGCGCTGCCA ACCGCCTCAT CCGTCTGTCT
CCTGGCGGCG CAGCGTCAGA CGCACCGCTT GCGCTGCGGC GCATCCTCTA TCCGGTTCCA
TTCACAGCGA CGGTGCTGAC ACGATCACGA GAGTTTGGCG TCGATCCCGC TCTCATGTAT
GCGTTGTTGC GTCAGGAGAG CGCCTTCGAC CCGGCGGCGA CCTCATGGGC GGGAGCGCGC
GGTCTGGCGC AGGTGATGCC TGCAACCGGT CAGGGTATCG CCCAGGCGCT TGGAGTAACT
GGATTCCGCG AAACAGATCT CTATCGCCCT GATCTGAGCA TTCGTTTTGG CGCGTTCTAT
CTCAGTCGCC AGATGACAGC GATGAATGGA AGTATCGAGG GAGCGCTTGC CGCGTACAAT
GGCGGACCCG GCAACGCGCG ACGCTGGTCG GGCGGCGCGC CGATCACCGA TCCCGATCTG
TTCGCCGAGC GGATCGACTT CGAGGAGACG AGAAATTATG TCAAGTCGGT AATCGCCCAG
TACGATGTTT ACCGGCGTCT GTACCGCTGG GACGGGGAAT GA
 
Protein sequence
MRCLWSVLVI ALSLIACTPE TATNVPSPSL IEAVTPVGTQ GTPETETNVP SPPDASLSTS 
LQSRPDMASP EAPGTPQPDS PPALPGGSSS SVASPDELLA RGLERREAGD YDAAAEAFFA
AANAARGTPT GRAARFYLAE SFALRERWTS AVEALNAFVA DGIQDDLTAR AWFWIARGHE
EAGSHAAAIA AYEQFRSFAT PAETYARLRQ AAQERAVGRL DAAAANYEAV ARSDLARSQR
AAAYEAAIQV RRDLRQIDGA LQLANELLTL AEQPAYRARL LIELADLPRS QGDLATARSW
LFEGLTRAPG LPVSLAMVDR LRTDPEIAIP PDLAARVYEA HSRWSDAVAA LDAALATADD
SQRADLLRRR ALALRGLGDF PAALTGFDAA IAAAGESDAG IQARLDRIQT VGQSGATEAA
IQGYRDFAAT FPNDSRAPEA LRRAAALLDR LGDGEAAAQQ RIDLGRRYPS LPLAQEAWFA
GGLHLFVSGQ AVQARQVWDE LAAAATGAAA LRARYWAGRA ALAAGNGEEG RALLDQVIAS
APDSYFAARA RVLLNRRETG AIAPDDPMSA DDWRSIEEWL ATWAGEPPPD TTNPADDPTI
RRARELDALR LRVEAMAEWS AALAIRNDNP YALYLLARYA HEQGAASVTL RAANRLIRLS
PGGAASDAPL ALRRILYPVP FTATVLTRSR EFGVDPALMY ALLRQESAFD PAATSWAGAR
GLAQVMPATG QGIAQALGVT GFRETDLYRP DLSIRFGAFY LSRQMTAMNG SIEGALAAYN
GGPGNARRWS GGAPITDPDL FAERIDFEET RNYVKSVIAQ YDVYRRLYRW DGE