Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2641 |
Symbol | |
ID | 5209610 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 3276139 |
End bp | 3278640 |
Gene Length | 2502 bp |
Protein Length | 833 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640596243 |
Product | lytic transglycosylase, catalytic |
Protein accession | YP_001276965 |
Protein GI | 148656760 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTGTC TTTGGAGCGT GCTGGTGATC GCACTGTCGC TTATCGCCTG TACGCCGGAA ACTGCAACAA ACGTTCCGTC TCCTTCCCTG ATCGAAGCGG TAACGCCGGT TGGAACTCAA GGTACGCCGG AAACCGAAAC AAACGTTCCG TCTCCTCCCG ATGCCTCCCT GTCCACTTCG CTGCAGTCGC GTCCCGACAT GGCATCGCCG GAGGCGCCGG GAACACCGCA ACCTGATTCG CCACCCGCTC TCCCCGGAGG TTCGTCTTCC TCTGTCGCCT CGCCCGATGA GCTGCTTGCG CGTGGGCTGG AGCGACGCGA AGCCGGCGAC TACGATGCGG CTGCTGAGGC GTTCTTTGCA GCTGCCAATG CCGCGCGGGG AACGCCGACG GGACGTGCCG CGCGCTTCTA CCTGGCAGAA AGTTTTGCCC TCCGCGAACG CTGGACATCG GCTGTCGAAG CGCTGAATGC GTTTGTTGCC GACGGAATCC AGGACGATCT GACAGCACGG GCATGGTTCT GGATTGCGCG CGGGCATGAA GAAGCCGGTT CGCACGCTGC GGCAATCGCG GCGTATGAGC AGTTCCGCTC CTTCGCCACA CCTGCTGAGA CATATGCTCG CCTGCGACAG GCCGCTCAGG AACGCGCCGT TGGTCGCCTC GACGCCGCTG CCGCGAACTA TGAGGCGGTT GCGCGCAGCG ATCTTGCGCG CAGTCAGCGC GCTGCGGCAT ATGAGGCGGC AATTCAGGTA CGCCGTGACC TGAGACAGAT CGATGGTGCG TTGCAGCTGG CAAACGAACT GCTAACGCTG GCGGAGCAAC CGGCATACCG CGCCCGCCTG CTGATCGAAC TCGCCGATCT GCCGCGCAGC CAGGGAGACC TGGCGACAGC GCGATCCTGG CTGTTCGAGG GTCTCACACG CGCGCCGGGG TTGCCGGTGT CCCTGGCGAT GGTGGATCGG CTCCGCACTG ATCCTGAGAT TGCCATCCCG CCTGATCTGG CAGCCCGCGT CTACGAGGCG CATAGCCGCT GGTCTGACGC AGTTGCTGCG CTCGATGCCG CACTCGCCAC GGCGGACGAC TCACAGCGCG CCGATCTGCT CCGACGACGG GCCCTGGCGC TGCGTGGTCT GGGAGATTTT CCCGCAGCAC TGACAGGGTT TGATGCCGCA ATTGCTGCAG CTGGCGAAAG CGACGCTGGC ATTCAGGCGC GCCTCGACCG GATTCAGACG GTCGGGCAGA GTGGCGCCAC CGAAGCGGCA ATTCAGGGGT ACCGTGATTT TGCCGCGACA TTCCCCAATG ATTCCCGCGC TCCAGAGGCG TTGCGTCGCG CTGCGGCGTT GCTCGACCGA CTCGGTGATG GAGAAGCGGC GGCGCAGCAG CGTATCGACC TGGGTCGGCG GTATCCGTCT CTGCCGCTGG CACAGGAAGC CTGGTTTGCG GGCGGGCTGC ATCTGTTCGT GTCTGGTCAG GCGGTGCAGG CGCGCCAGGT GTGGGACGAA CTGGCTGCCG CCGCCACAGG CGCAGCGGCG CTGCGAGCGC GGTACTGGGC AGGGCGTGCA GCGCTTGCCG CGGGCAACGG GGAAGAAGGG CGCGCATTGC TGGATCAGGT AATTGCGTCT GCACCCGATT CCTACTTCGC TGCACGCGCC CGCGTATTGC TCAATCGTCG GGAAACGGGC GCGATTGCGC CTGATGACCC GATGAGTGCG GATGACTGGC GTTCCATCGA GGAGTGGCTT GCCACATGGG CTGGCGAACC GCCGCCCGAC ACAACCAATC CGGCTGATGA CCCCACAATC CGGCGCGCGC GCGAACTCGA CGCGCTTCGT CTGCGCGTCG AGGCGATGGC GGAATGGTCG GCGGCGCTGG CAATACGCAA TGACAACCCA TATGCGCTCT ACCTGCTGGC GCGCTATGCG CATGAGCAGG GCGCTGCCAG CGTTACACTG CGCGCTGCCA ACCGCCTCAT CCGTCTGTCT CCTGGCGGCG CAGCGTCAGA CGCACCGCTT GCGCTGCGGC GCATCCTCTA TCCGGTTCCA TTCACAGCGA CGGTGCTGAC ACGATCACGA GAGTTTGGCG TCGATCCCGC TCTCATGTAT GCGTTGTTGC GTCAGGAGAG CGCCTTCGAC CCGGCGGCGA CCTCATGGGC GGGAGCGCGC GGTCTGGCGC AGGTGATGCC TGCAACCGGT CAGGGTATCG CCCAGGCGCT TGGAGTAACT GGATTCCGCG AAACAGATCT CTATCGCCCT GATCTGAGCA TTCGTTTTGG CGCGTTCTAT CTCAGTCGCC AGATGACAGC GATGAATGGA AGTATCGAGG GAGCGCTTGC CGCGTACAAT GGCGGACCCG GCAACGCGCG ACGCTGGTCG GGCGGCGCGC CGATCACCGA TCCCGATCTG TTCGCCGAGC GGATCGACTT CGAGGAGACG AGAAATTATG TCAAGTCGGT AATCGCCCAG TACGATGTTT ACCGGCGTCT GTACCGCTGG GACGGGGAAT GA
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Protein sequence | MRCLWSVLVI ALSLIACTPE TATNVPSPSL IEAVTPVGTQ GTPETETNVP SPPDASLSTS LQSRPDMASP EAPGTPQPDS PPALPGGSSS SVASPDELLA RGLERREAGD YDAAAEAFFA AANAARGTPT GRAARFYLAE SFALRERWTS AVEALNAFVA DGIQDDLTAR AWFWIARGHE EAGSHAAAIA AYEQFRSFAT PAETYARLRQ AAQERAVGRL DAAAANYEAV ARSDLARSQR AAAYEAAIQV RRDLRQIDGA LQLANELLTL AEQPAYRARL LIELADLPRS QGDLATARSW LFEGLTRAPG LPVSLAMVDR LRTDPEIAIP PDLAARVYEA HSRWSDAVAA LDAALATADD SQRADLLRRR ALALRGLGDF PAALTGFDAA IAAAGESDAG IQARLDRIQT VGQSGATEAA IQGYRDFAAT FPNDSRAPEA LRRAAALLDR LGDGEAAAQQ RIDLGRRYPS LPLAQEAWFA GGLHLFVSGQ AVQARQVWDE LAAAATGAAA LRARYWAGRA ALAAGNGEEG RALLDQVIAS APDSYFAARA RVLLNRRETG AIAPDDPMSA DDWRSIEEWL ATWAGEPPPD TTNPADDPTI RRARELDALR LRVEAMAEWS AALAIRNDNP YALYLLARYA HEQGAASVTL RAANRLIRLS PGGAASDAPL ALRRILYPVP FTATVLTRSR EFGVDPALMY ALLRQESAFD PAATSWAGAR GLAQVMPATG QGIAQALGVT GFRETDLYRP DLSIRFGAFY LSRQMTAMNG SIEGALAAYN GGPGNARRWS GGAPITDPDL FAERIDFEET RNYVKSVIAQ YDVYRRLYRW DGE
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