Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2624 |
Symbol | |
ID | 5209593 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 3251830 |
End bp | 3255363 |
Gene Length | 3534 bp |
Protein Length | 1177 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640596228 |
Product | cyclic nucleotide-binding protein |
Protein accession | YP_001276950 |
Protein GI | 148656745 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGCGA TGGCAACGCT CGACGATGTA ATAACTCACG CATCCCAACC AACAGCTGCT GGCGCCCAAC CGCTTCCGGG CGGCATATGG GCTGCGGTGC GGCGGCGCGT TGCCGAACCT CCGGCAACAA ACGTCCGGGT CTTCACGATC CTGCGCGAGC GTGGCGTTCA ACAATCGGAA GAACTACGCT TGTGGACGAT CCTGCGCGAA CGGACGAATC CGCAACTGTA CCGACCACAC GCCATTCCCG ATGTGGCCGC CGATCCAGTC GTCGAAGGGG GACAGACGCA CTATATTGTA CGCACCCCAC AGGGCGCCTA TCTCCGCCTG ACCGAAGCGC AGCATGAGGT CTGGCGGGCA ATGGATGGCA CGCGCACCAT TGCCGAACTG GGGCTGGACG CATTTCGCCG GCATAGCCTG ATCCTGCCGA TCGGTGAACT GGTCGCAACC CTCAAGGCGG AAGGGTTGCT GCTCGATAAG CCGGTAGGCG TGTACCGTGC AATCAACGAA GCGCTTGCCA GAGGAACAAC CCGCACATGG GGACGCCGGA TCAGGCGCGT GTTGACAGGC GCAACGCTCA CCCTGCCCGG CATCGATGCG TTCTACAGCG CAATCTATCG CTGGGGCGGC AGATTGCTGT TTACCCGCGT TTTTGCCGTG CTTGCCAGCA TCGTCGCGCT TGCCGGAATT ATCGCCTTCG GACTGGCGAT GAGCAGCGGA TCCGATACGT ATGAGGTCAT CAGACTCAAC GGCTCGGTGA TGCTGGGGCT GGCAGCACTC TGGGCAGTCA CGCTTCTGTC CTTCGTGATC CACGAAAGCG CGCATGCACT GGCGGTCAAA CATTTCGGAC GTGCGCTGAC GCGTGGCGGT GTGATGCTGT ACTACGGCTT GCCTGCCGCC TTTGTGGACA CCAGCGACAT CTGGCGCTCG CCGCGCTCGG CGCGCATTAT CGTTTCGGCA GCCGGTCCTG CGGCAGATCT GCTGGTCGGC AGCCTGGCAG CCATCACCGC ATACCTGTCG CCGGATGCTG CGATTGGGTC GATAGCCTAC AAACTGGCAT TTACCAGTTT CGTGTCGAGC GTCTTCAATC TGAATCCACT CCTCGAACTC GATGGCTACT ACATTCTTGT CGATCTGCTG CGGATGCCGG ATCTGCGCCG TCAGGCGCTG GCGTATGTGC GTGGTCCGCT GTGGGACAAA CTGGGCGCTC ACCTGCGGAT GCGCTCGACG CGCTGGATAC GCCGTGCTTC CAGACATCCG CAGGCGACGA CGGTCAACCT GGACGAGCGC ACACTGCCGT TCAGTCGCCA GGAGCGCGTG TTCGCGCTGT ATGGAGCAGC CACGGCGCTT TACACTGCGC TGGCGATCAT CGGCGCCGCC TGGTTCTGGC GTGCGCAGAT CCTCGAACCC GCGCTCGAAC TGTTGCGGGG AGTCTGGTGG CAACAAGTGA TCGGCGCGCT GCTGATCCTG ATCGTTGTGC TGCCAGCAGT TGCAGCCGTC CTGCTGGCTC TGTGGGAAGC AGGGCAAACC ACGGTCGGCT GGCTGGTGCG GCGCGGTTAT GGACGGCAAC CCGGCCTTCT TTCAGCTTTC GGCGTCCTGC TGGCGATCAG CGCATCGCTG GCGGTTCTGG CAACCCAGGA GGGTGGGTGG AGATGGGTCG GTCTGGCGCT CGGACCGGCG CTCTGGATTG TGGCGCTCAA CGCGCTGCTG GCTGTCCGCC CGTACTACCG CGGCGCCGCC ATCTACCCGG CAATACTGGC GTTGATCGCA ACGACAGCGC TTGCCGGGCT GGCTGGCATC GCGCGCATGC TCCCCATATC TCCGGGCATC TGGGTGATGC TTGACGGGCT GGCGTTCGTC GGGTTGCTGA TAGCGGGTTT TACCGCGCTC CTCGATGTGG ATCTGCGCGC CGCGCCGCTG CGCGAATTGC TGGGGACCGC CGTCCTGCTC ATGGCTGCAT TCGCAATTGG CGGAGCAGCA CTCTTCAGCG CCCAGACAGT CTACCCCACG GCGGGGGCGC TCACGCTCCT GATCACGGCA GCGCCAGCAT ACTTCGGCGC GCTGGCGCTG GCGCTCCTCC TGCAACACCT GTTCGGTCTG GCAGACTCGC GGATGGTCTG GGCGTGGGCG TTGCTCTGGG CAGGCGCCCT GGTCGAAACG GCCGGCTATA TTGCCGATCT GCACGGGCGC GGTCTGGCGC TCGATGTGCT GGGATCGGGA TTGTGGGCGA CAGCGTGGCT GGTGCATCTT GCAACACTCC GCCATCTCAC GCTGAGCGAA TTCCGCTGGG AACACATTCC CAATATGAGC GAAAGCGACC GTCTTGCGCG GGCATTTCAA TTGACGTACC ATGGGTGTTA TGCAATGCTA CACTCAGTCT ACGGTGAGCG CCGCGCGCGT GCGCTCGATG ACCGGATGGA CATTCTGGCT GCCACGGCGG ACTGGGATGT CACCCTGGAT CACGAACGCG CACGGATTGG CGCACAGGTG CGAACTCTCC CGATTGCGGA GCAGGGTGCG CGGTTTGCTG AAGTGTTACG CTACACCGTC GCCGAGATCG AACAGATTGC CGGTGTTGCA TTCGCGCGAC GCTGCATTCA GGCGGCATAC GACGCACTGC CCTGGCCCGA ACGTGAGACC GCCAGCCGCC TCTGCTTCCC CGACACGCCG TGGGCGCGTG AATTGTCGAG TTCGTTTGGT GACATACGTG CAGCGCGCCT GCGGTTACTG CGGCAGGTGG ATATTTTCCT GAACTGCGAC GACGAAGAAC TGGAGGCGCT GGCGTCCAGC GTCGTCGAAC AGACCTGCGC TGCGGGCGCG ATAGTGCTAC GGTCGGGCGC TCCGGTTCCG GGCATCTGGA TTATTGAAGC CGGGGAAATC ATCGCCCGAC GGGGCGGGCG CATCGTTGCC GAACTGCACC GCGGCGACGT TATCGGCGTC GAAGAAGTGC TGGGCGGTAA ACCGTGTCTC CACACCTACC GCGCGACGGT CGCATCGAGC CTGCTCTACC TCCCAGCGGA CGAATTTTTC CGCCTGACTG CCGAACGCGC ACCGCACGCC GCAGACGGGA TGGAGTCGGT TGAAGTACTG CGTCTGCTGG AGCGCGTGCC GTTGTTCGCC GACCTGCCGC GCAACACGCT GCGCGGACTG GTCGCCATCG CCGAACAGCG CACCTACCCG GCGCGCACAG TGGTTGTGCG CCAGGGGACG CCGAGCGGGA CATTCTTCAT CATCCGCAAA GGCACAGCGG CAGTCGTCCG CCGCGAGGCG GCAACCAACG GAGCGCCGGC AACGACCCGA CCCATCGCGC GGTTGGGACC GCAGGAATTC TTTGGTGAAC TCGAACTGCT GCGCAATGCG CCGCCGGTGG CAAGCGTCAT CGCGCTCACA TCGCTCACCG TGCTGGCATT GCCGCATGCC GCCATCCAGG CGCTGGTTCA CAGCGATGGC GGCGTGTCGC GGAGGCTGGA ACGGATCGGC AGCGGGCGGT TGAAGGCGTT AGAGGGAGGA GAAAGGCCTC ATGCCGAAGT GTGA
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Protein sequence | MDAMATLDDV ITHASQPTAA GAQPLPGGIW AAVRRRVAEP PATNVRVFTI LRERGVQQSE ELRLWTILRE RTNPQLYRPH AIPDVAADPV VEGGQTHYIV RTPQGAYLRL TEAQHEVWRA MDGTRTIAEL GLDAFRRHSL ILPIGELVAT LKAEGLLLDK PVGVYRAINE ALARGTTRTW GRRIRRVLTG ATLTLPGIDA FYSAIYRWGG RLLFTRVFAV LASIVALAGI IAFGLAMSSG SDTYEVIRLN GSVMLGLAAL WAVTLLSFVI HESAHALAVK HFGRALTRGG VMLYYGLPAA FVDTSDIWRS PRSARIIVSA AGPAADLLVG SLAAITAYLS PDAAIGSIAY KLAFTSFVSS VFNLNPLLEL DGYYILVDLL RMPDLRRQAL AYVRGPLWDK LGAHLRMRST RWIRRASRHP QATTVNLDER TLPFSRQERV FALYGAATAL YTALAIIGAA WFWRAQILEP ALELLRGVWW QQVIGALLIL IVVLPAVAAV LLALWEAGQT TVGWLVRRGY GRQPGLLSAF GVLLAISASL AVLATQEGGW RWVGLALGPA LWIVALNALL AVRPYYRGAA IYPAILALIA TTALAGLAGI ARMLPISPGI WVMLDGLAFV GLLIAGFTAL LDVDLRAAPL RELLGTAVLL MAAFAIGGAA LFSAQTVYPT AGALTLLITA APAYFGALAL ALLLQHLFGL ADSRMVWAWA LLWAGALVET AGYIADLHGR GLALDVLGSG LWATAWLVHL ATLRHLTLSE FRWEHIPNMS ESDRLARAFQ LTYHGCYAML HSVYGERRAR ALDDRMDILA ATADWDVTLD HERARIGAQV RTLPIAEQGA RFAEVLRYTV AEIEQIAGVA FARRCIQAAY DALPWPERET ASRLCFPDTP WARELSSSFG DIRAARLRLL RQVDIFLNCD DEELEALASS VVEQTCAAGA IVLRSGAPVP GIWIIEAGEI IARRGGRIVA ELHRGDVIGV EEVLGGKPCL HTYRATVASS LLYLPADEFF RLTAERAPHA ADGMESVEVL RLLERVPLFA DLPRNTLRGL VAIAEQRTYP ARTVVVRQGT PSGTFFIIRK GTAAVVRREA ATNGAPATTR PIARLGPQEF FGELELLRNA PPVASVIALT SLTVLALPHA AIQALVHSDG GVSRRLERIG SGRLKALEGG ERPHAEV
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