| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2583 |
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| Symbol | |
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| ID | 5209552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 3201462 |
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| End bp | 3206606 |
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| Gene Length | 5145 bp |
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| Protein Length | 1714 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640596187 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001276909 |
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| Protein GI | 148656704 |
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| COG category | [K] Transcription |
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| COG ID | [COG2909] ATP-dependent transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGATCA CGATCTCTTT CCAGCGGACC GCCATTGATC GCGTGGAAGC GCAGATTGAT
GCGCAGCTGG CGGCATCCTT CGAGCCGGCG GCCCTGATGG TTGATCAGCC CCTCTTTTCA
CAACGCCCGG CGCCCGCCGA TCCACGGGCG TATGGGCAGC GCCTGTTCGC CGCATTGGGC
GGTGATACGT TCCGCGCTGC GCTGGCGCGC CTGCCGCGCG CCCCGCATAT GGATAGCCTG
ATCGCCATCC AGACCGCCGA TGCGGAACTG GCGTCCATTC CCTGGGAGTA CCTGCACGAC
GGCGCCGATT TCCTGATCCT CAACTATCTG CTGGTGCGCG AGGTGCCCGA TGCGCCGCTT
CCTGCGCCGC CTGCGCCTGA CCTGCCCTGG CGGCTGGTGG TCATGGGCAG CGACCCGCTG
GTACAGGAGG TGCGTGATCC GAAAACAGGG TTGTTCACCG GCTATGCGCC GATGCAGCGG
CTCAAGGTTG TGCAGGAACT CGACCTGCTG CGCGATGACC TGCTGCGCCA GAACCCGCCC
GCGCCGATCC GCTGGCAGCG CATCGCGCCG ACCCGCCAGG CGCTGATTGA CGATCTCGAC
CCGCGCGAAC CGATCCTGTT CCACTATACC GGTCACGGCG ACGTTGAGAA CGGGGCGCCG
GTGCTCTGCT TCGACGACGG TACCGGCTGT ATGGACCCGC GTCCGGTGAA CGACCTGGCC
GCCGATCTGC GCGGATTGGT CTATCTTGCC TTCCTGAACG CCTGCCGCAC CGCCGATAGC
CGCGAGCCGG GGGCGAATCT GGCGCTGGCG CTGGTGCAAC ACGGCATTCC GGCGGTGCTG
GGAACCCAGT ACCAGGTGCT CGACGAAGCT GCTGCCCATG TTGCCCGTAC CTTCTATCGC
TTGCTCGCGT CAGGCCAGCA TCCGGCGCAG GCCCTCTATC GGGCGCGTTT GCAGCTCAAG
AACCAGTTTC GCAGCGAGCC GCGCGAGTGG GCGATTCCCG TGCTTTACCT TGCCCAGAAC
TATGCCTGGC AGGTGCAACG CCCGGTCCTG AATGAGCCGC TGCGCCCGCT GGAACCGCCT
GTACCACACA CCACACAACT GCGCGCCCCC GATCAATCAG CCGGGCGTTT CGTTGGCCGG
AACAAGGAAC TGCTGGATCT GGCGCGCCTC TTCATCAACG AGCAGCGAAG GATCGTCACG
ATTCGCGGCG CGGGCGGGAT GGGTAAGACA GCCCTGGTCA ACGCGCTTGC CGAACGGCTG
CGCTTTCACT TCCGCGATGG AATCGTGGCG GTGAGCCTGT TCCTGCCCGG CGAAAACGCG
CCGTTGCGCG CGGCTCAGGT GCGCCGCGAC CTTGCGACGC TGCTGGGTCT CCAGCATCCG
GCGTTCGATC TGCCTGACGC GGTGAAAGAG CAGGAACTCG CGCTGGTCGA GGCCGCGCGC
GCCCGACCGC GCCTGCTGCT GATCTGGGAC AACTACGAGA CCGTGCTCTG GCGACTGGGG
CGTGAAGCGA GCGACCCGAG CAGCGCCCCC TTCGATGAAG CGCAACGCAC CGAAGCGGCG
GCTGTGCAGC GCCTGGTGCG GTTGCTGGCC GACAAGGGCG TGCACCTGAT CTTTACCTCG
CGCCAGTCGC CGGTCGGGCT GGCAGGCGAA ACCTTCTACC CGCCCGCCGA ACGGGGCCAC
CAGCTCGGCG GGCTGGACCC GAACGATAGC GTGCGCCTGC TGCGCATGCG GGTCGGGCAG
CGCCTCCCTT CAACGACATT TCTCGAACAG CTGGCAGCCG CCGTCGGCTA CAACCCGCTG
GCGATGAACC TGGCCGCCGC CCGCTGGGCG AACAGCCAGG ACGATGAACC GACCTTCATT
GCCAACCTGC GTGACGAACT GAGCAAAGCG CGCGACCCCG CCGCCCCGAT GTACCAGCAG
TCATCGGTCG AAATCAACGT GCGCCTCTCG CTCAATGCGC TGCCTGCCGA CCTGCGCGCC
GATCTGCTGG CGTTGACGAT CATCGCCAAC CCGGTCATCA TCCCCCGGCA CGGCGCGGTG
ATCTGGGGGC TGGAAGATGA AACCCAATGG TTTGACGACC AGGCCCACAC CCGCCTGGAG
CAGTTGCATC AGGCGTCGCT CCTGCAGGGC CAGGGCTATG ACGAGCAGCG TAACCGCGCG
CACGCCTACA GCCTGCACCC ACTGATCGCC AGCGTGCTGA GCCGGCTGGC GCAGGAGCTC
GACCTGAGCG ACGCGCGCGC GCGCTATGCT GCCTGGAGCG ATCACCTGGT GAGCCGGGCA
TACGATCCGG AACACGGCAT CGACGCCGAC CCTGCTGTGG CGGCGCAGAC ACAATTCTTG
CTCGCCGACA TCGCCGCCGC TGTTCCATAC CTGCCCCCCG AACAGCGTGG CTGGGCAGCC
TGGCGGGCAG CCTCGGTCTT CGAGCGCCTG GGCCAGCCTG AACAGGCGTA CCAGAGCATT
ACACTGGCAG AGGCAACTGC AAGAGAAACT GAGAATCAGG AGCTGCTTAG CCGGGTCTAC
CACCAGCGGG CAACCTTGCT GGAGACGCGC GGCGACCTCG ACGGGGCGAT GCGCCTCTAC
GAGCAGTCCC TCGCCATCCA GGAAAGCCTG GGCGATGTGC GCGGCACGAG CGCCACGCTC
CACGCGATGG CCGGCGTGCT GGTGACGCGC GGCGACCTCG ACGGGGCGAT GCGCCTCTAC
GAGCAGTCCC TCGCCATCAA GGAAAGCCTG GGCGATGTGC GCGGCAAGAG CGCCACGCTC
CACCAAATGG CCGGCGTGCT GGTGACGCGC GGCGACCTCG ACGGGGCGAT GCGCCTCTAC
GAGCAGTCCC TCGCCATCCA GGAAAGCCTG GGCGATGTGC GCGGCAAGAG CGCCACGCTC
CACCAAATGG CCGGCGTGCT GGTGACGCGC GGCGACCTCG ACGGGGCGAT GCGCCTCTAC
GAGCAGTCCC TCGCCATCAA GGAAAGCCTG GGCGATGTGC GCGGCAAGAG CGCCACGCTC
CACGCGATGG CCGGCGTGCT GGTGACGCGC GGCGACCTCG ACGGGGCGAT GCGCCTCTAC
GAGCAGTCCC TCGCCATCCA GGAAAGCCTG GGCGATGTGC GCGGCAAGAG CGCCACGCTC
CACGCGATGG CCGGCGTGCT GGTGACGCGC GGCGACCTCG ACGGGGCGAT GCGCCTCTAC
GAGCAGTCCC TCGCCTCTGA TGAAAGCCTG GGCGATGTGC GCGGCACGAG CGCCACGCTC
CATAATATGG CACACGTGCT GGAGACGCGC GGCGACCTCG ACGGGGCGAT GCGCCTCTAC
GAGCAGTCCC TCGCCATCCA GGAAAGCCTG GGCGATGTGC GCGGCAAGAG CGCCACGCTC
CACGCGATGG CCGGCGTGCT GGAGACGCGC GGCGACCTCG ACGGGGCGAT GCGCCTCTAC
GAGCAGTCCC TCGCCATCAA GGAAAGCCTG GGCGATGTGC GCGGCACGAG CGCCACGCTC
CACCAAATGG CCGGCGTGCT GGTGACGCGC GGCGACCTCG ACGGGGCGAT GCGCCTCTAC
GAGCAGTCCC TCGCCATCCA GGAAAGCCTG GGCGATGTGC GCGGCAAGAG CGCCACGCTC
CACCAAATGG CCGGCGTGCT GGTGACGCGC GGCGACCTCG ACGGGGCGAT GCGCCTCTAC
GAGCAGTCCC TCGCCATCCA GGAAAGCCTG GGCGATGTGC GCGGCAAGAG CGCCACGCTG
GTGATGATGG CACAGATACA GTTTGCACGG GGTGATCACG AAACGGCGCT GCGCAATGCG
CGCGAGAGCC TGCGCCTGCT TCAGGCGATG GGCGCGGCGC CTGATGCGGC AAAGGTGGCT
GAGATTGTTC AGCAAATGGA AGCGGCGCTG GCCGGTGGCG CGTCGCCCCA ACCTGCGGCG
TTCACCCCTG CCCGGCTGGT CGGTGCGCTC ATCGGGGCAG TGGTGCGTGT TCAGCGTGGC
CAGATGCCGG CTGCGGATCT GCGGGCCGAT CTTGAGCGGC TGTCAGCTGA AGCAACGTTG
ACGCCAATCA CCACCGCGCT GCTGGCGGCG CTTGATGGCG CTGCCGATGC CGCGGCGACG
CTGCTGGTCG CTGCTGAGCC GCTGCTGGCT CAGGGCGCCG CCGCTGAACG CGCCGATGCG
CTGGCGGGCA TCGGCAACCT GGCGGCGCTG CTCGATGACC ACGCAACGGA ATTGCGCGCG
CGTGAAGCGG CCGTGGCGGC CTTCCGCGCG GCGGGTGACG ACCGGCAATC CCTGGTGAAC
CTGAGCATTG CGCTGTACAA TCTGGCGATG CTGTATGCCC GTCAGGGCAA CCATGCCGCA
GCCGTGCCCT TGCTCGAAGA GGTCGTTGCC CTTGACGAGC GCACCGGTCA CCCTGATCTG
GCGAGCGACC GGGCGAAACT GGAAGAGATG CGCCGGCACG CTGCCGGTCT GCCGGAGGTA
TCGCTGGTTG ATGTTATCGC CGAATGGCGC GATGGGGACC GCGATCACGA GCAATTTGTG
AACCTGCTCA ACCTGGTCTG CAACCTGTAT GTCCAGACGA TGAGCGATGG CAGCAGCGAT
CAGCGTGAGC GGCTGGCGGA GGATCTGGCG CACCTGCGGG CGATCCGTCC CCTGCCCGTC
GCCGGGGCGA ACGACTTCCT GGCGGTGCTT CAGCTCCGTC TGCGCGATGA ACCGGGGATG
ACAGAACGGG CGGCGCGGAT CGCGGCGACA CTCCCGGCGC AACTGGCGCA GGCGCTGGCT
ATGATGGATC AGGCGATCAG CGGTGAACCT GTCGCGCCGC CAGCGGATAG CGATGAGCAG
GAGGCTGCGG CAGCGATGGC GGCGATGTTG AGCGGCCTGC CGCCGGAGCA GCGCGCCGAA
CTCCAGATAC TGGCACAGGT GGTGCCGCTG GTGCTGCATG GCATCGGTCT GCTCCGGCAA
CCTGATCTCA CCGCCGCCGA ACGCGGGCGG TTCGCGGAGG TTCTTGAACA GGCGGCGAGC
CAGGCTGAAA CCGGCGAAAC GGCCGGTTCA CCCTGGCTGG CGGCGGCGGG TGTCCTGCGC
CAGGTCGCGG GCTGGTTGAA GGGCGCCCCT GCCGCGCCTG ATACCCTGCC TGAGCCGTAC
CGGAGCCTGG TGATGCGGAT GCTGGAGGGC GCTGGCGATG AGTAA
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| Protein sequence | MPITISFQRT AIDRVEAQID AQLAASFEPA ALMVDQPLFS QRPAPADPRA YGQRLFAALG
GDTFRAALAR LPRAPHMDSL IAIQTADAEL ASIPWEYLHD GADFLILNYL LVREVPDAPL
PAPPAPDLPW RLVVMGSDPL VQEVRDPKTG LFTGYAPMQR LKVVQELDLL RDDLLRQNPP
APIRWQRIAP TRQALIDDLD PREPILFHYT GHGDVENGAP VLCFDDGTGC MDPRPVNDLA
ADLRGLVYLA FLNACRTADS REPGANLALA LVQHGIPAVL GTQYQVLDEA AAHVARTFYR
LLASGQHPAQ ALYRARLQLK NQFRSEPREW AIPVLYLAQN YAWQVQRPVL NEPLRPLEPP
VPHTTQLRAP DQSAGRFVGR NKELLDLARL FINEQRRIVT IRGAGGMGKT ALVNALAERL
RFHFRDGIVA VSLFLPGENA PLRAAQVRRD LATLLGLQHP AFDLPDAVKE QELALVEAAR
ARPRLLLIWD NYETVLWRLG REASDPSSAP FDEAQRTEAA AVQRLVRLLA DKGVHLIFTS
RQSPVGLAGE TFYPPAERGH QLGGLDPNDS VRLLRMRVGQ RLPSTTFLEQ LAAAVGYNPL
AMNLAAARWA NSQDDEPTFI ANLRDELSKA RDPAAPMYQQ SSVEINVRLS LNALPADLRA
DLLALTIIAN PVIIPRHGAV IWGLEDETQW FDDQAHTRLE QLHQASLLQG QGYDEQRNRA
HAYSLHPLIA SVLSRLAQEL DLSDARARYA AWSDHLVSRA YDPEHGIDAD PAVAAQTQFL
LADIAAAVPY LPPEQRGWAA WRAASVFERL GQPEQAYQSI TLAEATARET ENQELLSRVY
HQRATLLETR GDLDGAMRLY EQSLAIQESL GDVRGTSATL HAMAGVLVTR GDLDGAMRLY
EQSLAIKESL GDVRGKSATL HQMAGVLVTR GDLDGAMRLY EQSLAIQESL GDVRGKSATL
HQMAGVLVTR GDLDGAMRLY EQSLAIKESL GDVRGKSATL HAMAGVLVTR GDLDGAMRLY
EQSLAIQESL GDVRGKSATL HAMAGVLVTR GDLDGAMRLY EQSLASDESL GDVRGTSATL
HNMAHVLETR GDLDGAMRLY EQSLAIQESL GDVRGKSATL HAMAGVLETR GDLDGAMRLY
EQSLAIKESL GDVRGTSATL HQMAGVLVTR GDLDGAMRLY EQSLAIQESL GDVRGKSATL
HQMAGVLVTR GDLDGAMRLY EQSLAIQESL GDVRGKSATL VMMAQIQFAR GDHETALRNA
RESLRLLQAM GAAPDAAKVA EIVQQMEAAL AGGASPQPAA FTPARLVGAL IGAVVRVQRG
QMPAADLRAD LERLSAEATL TPITTALLAA LDGAADAAAT LLVAAEPLLA QGAAAERADA
LAGIGNLAAL LDDHATELRA REAAVAAFRA AGDDRQSLVN LSIALYNLAM LYARQGNHAA
AVPLLEEVVA LDERTGHPDL ASDRAKLEEM RRHAAGLPEV SLVDVIAEWR DGDRDHEQFV
NLLNLVCNLY VQTMSDGSSD QRERLAEDLA HLRAIRPLPV AGANDFLAVL QLRLRDEPGM
TERAARIAAT LPAQLAQALA MMDQAISGEP VAPPADSDEQ EAAAAMAAML SGLPPEQRAE
LQILAQVVPL VLHGIGLLRQ PDLTAAERGR FAEVLEQAAS QAETGETAGS PWLAAAGVLR
QVAGWLKGAP AAPDTLPEPY RSLVMRMLEG AGDE
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