Gene RoseRS_2571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2571 
Symbol 
ID5209540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp3187605 
End bp3188381 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content60% 
IMG OID640596175 
Productregulatory protein, IclR 
Protein accessionYP_001276897 
Protein GI148656692 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.853506 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCCAGA CACTCCAGAA AGCCGTCGAA GTTCTGAGTC TCTTCTCACC GACGCATCCT 
GAGTGGACGG TCGGTGACAT CGCTCGCGCG CTTGAACAGC CAAAATCGAG CACCTCGGAG
TTGTTGAGCA GCATGGCGGG ACAGGGATTA CTGCGCCGCA CCGGTCCAGG ACGGTACCGT
CTGGGGTGGC GGTTGCTCGA ATTCGGTCAG ACCCTGCTCA AGACGACCGA GTTCCGCGCC
GAGGCGCGCC AGGTGATGGA AGAGGTTGTG GCGCGTTGGG GCGAAACGAT GCACCTTGCA
GTTCTGGAGA ACGGTCAGGT CATCTACATT GAAAAACTCG AAGGAACGCA TGCGGTTCAC
ATTTCGCTTT CGGGGGTCGG TGCGCGTCTG CCGGCGCACT GTAGCGGCGT TGGCAAAGTG
TTGCTCGCGC ATGCGCCGTG GAGCGAGGTC GCGCAGATCC TCGAACAGCA GGGCATGCAA
GCATTCACGC CCAACACCAT CACCACCCCG GAAGAACTGG CACGCGAACT GGATCAGGTG
CGGCAACGCG GCTATGCGTG CGATCAGGAA GAAATTTCGA TCGGTCTGTG TTGCGTTGCC
GCGCCGATCT ACAACTTTGA AGGGCGTGTG ATCGCAGCGA TGAGCATTTC GCTGCCGACG
CATCGCTTCC AGGCGCAGCG CGCCGGTTAT GTTGCACTCA TTGTAGAGGC GGCTCAGCGT
GTCTCCGAAA ACCTGGGCTA CCACAGAGGA ATGCCTCGAT GGGCGATGAA ACGATAA
 
Protein sequence
MLQTLQKAVE VLSLFSPTHP EWTVGDIARA LEQPKSSTSE LLSSMAGQGL LRRTGPGRYR 
LGWRLLEFGQ TLLKTTEFRA EARQVMEEVV ARWGETMHLA VLENGQVIYI EKLEGTHAVH
ISLSGVGARL PAHCSGVGKV LLAHAPWSEV AQILEQQGMQ AFTPNTITTP EELARELDQV
RQRGYACDQE EISIGLCCVA APIYNFEGRV IAAMSISLPT HRFQAQRAGY VALIVEAAQR
VSENLGYHRG MPRWAMKR