Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2571 |
Symbol | |
ID | 5209540 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 3187605 |
End bp | 3188381 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640596175 |
Product | regulatory protein, IclR |
Protein accession | YP_001276897 |
Protein GI | 148656692 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.853506 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCCAGA CACTCCAGAA AGCCGTCGAA GTTCTGAGTC TCTTCTCACC GACGCATCCT GAGTGGACGG TCGGTGACAT CGCTCGCGCG CTTGAACAGC CAAAATCGAG CACCTCGGAG TTGTTGAGCA GCATGGCGGG ACAGGGATTA CTGCGCCGCA CCGGTCCAGG ACGGTACCGT CTGGGGTGGC GGTTGCTCGA ATTCGGTCAG ACCCTGCTCA AGACGACCGA GTTCCGCGCC GAGGCGCGCC AGGTGATGGA AGAGGTTGTG GCGCGTTGGG GCGAAACGAT GCACCTTGCA GTTCTGGAGA ACGGTCAGGT CATCTACATT GAAAAACTCG AAGGAACGCA TGCGGTTCAC ATTTCGCTTT CGGGGGTCGG TGCGCGTCTG CCGGCGCACT GTAGCGGCGT TGGCAAAGTG TTGCTCGCGC ATGCGCCGTG GAGCGAGGTC GCGCAGATCC TCGAACAGCA GGGCATGCAA GCATTCACGC CCAACACCAT CACCACCCCG GAAGAACTGG CACGCGAACT GGATCAGGTG CGGCAACGCG GCTATGCGTG CGATCAGGAA GAAATTTCGA TCGGTCTGTG TTGCGTTGCC GCGCCGATCT ACAACTTTGA AGGGCGTGTG ATCGCAGCGA TGAGCATTTC GCTGCCGACG CATCGCTTCC AGGCGCAGCG CGCCGGTTAT GTTGCACTCA TTGTAGAGGC GGCTCAGCGT GTCTCCGAAA ACCTGGGCTA CCACAGAGGA ATGCCTCGAT GGGCGATGAA ACGATAA
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Protein sequence | MLQTLQKAVE VLSLFSPTHP EWTVGDIARA LEQPKSSTSE LLSSMAGQGL LRRTGPGRYR LGWRLLEFGQ TLLKTTEFRA EARQVMEEVV ARWGETMHLA VLENGQVIYI EKLEGTHAVH ISLSGVGARL PAHCSGVGKV LLAHAPWSEV AQILEQQGMQ AFTPNTITTP EELARELDQV RQRGYACDQE EISIGLCCVA APIYNFEGRV IAAMSISLPT HRFQAQRAGY VALIVEAAQR VSENLGYHRG MPRWAMKR
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