Gene RoseRS_2548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2548 
Symbol 
ID5209517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp3160188 
End bp3161291 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content65% 
IMG OID640596152 
Productglycosyl transferase, group 1 
Protein accessionYP_001276874 
Protein GI148656669 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.742963 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.196776 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCATATCC TTCACATCTA CAAAGACTAC CCGCCGGTAC TGGGGGGTAT TGAGGGACAC 
GTGCGCGACC TGGCGGAGGG ACTGGTTGCG CGCGGGTATC AGGCAACGGT GCTGGTGACC
AGTACGGATC GCGGCACCTC GATTGAGCGA CCGTCGCCGG GTCTGACCGT GATCCGGGCG
GCGCGGATGC TGCACCTGGC ATCGACGCCG CTCAGCCCGG CGATGATTGC GCTGGCGCGG
GGCATTCGCG CCGACATTGT TCACCTGCAG TTTCCCTACC CGCCGGGTGA CCTGGCAGCG
CTGGCAGCGC CTGGATCGCC GCCGCTCGTC ATTTCGTACC AGAGCGATAT TGTGCGCCAA
AAAACGCTGT TGCGCCTCTA CCGACCGTTG CTGGCGCTGA CCTTGCGACG CGCAGCGCGG
ATCATCACGT CCAGTCCTGG GTACATCGCC TCATCGCCGT TTCTTCGCCC CTATGCCGCA
AAATGCGAGG TTGTTCCGAT TGGCGTCGAT GTCACGCGGT TCACTCCCAA CGACAGGCGC
GCCAACGCCG TGCCGCGCCT GCTCTTCGTC GGACGACTGC GGTACTACAA GGGGCTGCAT
TTCCTGATAG AGGCGCTGCG ACAGGTCGAA GGGGCGGAAC TCTGGATTGC CGGGAACGGT
CCAGAGCGCA CGCGACTGGA GCGACAGGTT GCCGATGCCG GGTTGGGTGA TCGGGTGCGC
TTTCTCGGCG ATGTGGCGGA TGAGGACCTG CCCGCGCTCT ACCGGCAGGC GGATATCTTT
GTGCTCCCAT CGCACCTGCG CGCGGAAGCG TTCGGCATTG TGCTGGTCGA AGCGCTGGCG
AGCGGGTTGC CGTGCATCAG CACCGCGCTC GGAACCGGCA CCGATTTTGT GAACGTCCAC
AACGAGACAG GGCTGGTTGT TCCGCCAGGC GATGCGACGG CGCTGGCGGA GGCAATCCGA
CGCCTTCGGG ACGACCCGGC GCTGCGTGCA AGGTATGGTC AGGCAGCCGT ACATCGCGCG
CGGACACTCT TCTCACGCGA GCGCATGCTG GATGCGGTAG AGCGGGTCTA TCGTCAGGTG
GTGCGCGAGA GAGGTCAAGC CTGA
 
Protein sequence
MHILHIYKDY PPVLGGIEGH VRDLAEGLVA RGYQATVLVT STDRGTSIER PSPGLTVIRA 
ARMLHLASTP LSPAMIALAR GIRADIVHLQ FPYPPGDLAA LAAPGSPPLV ISYQSDIVRQ
KTLLRLYRPL LALTLRRAAR IITSSPGYIA SSPFLRPYAA KCEVVPIGVD VTRFTPNDRR
ANAVPRLLFV GRLRYYKGLH FLIEALRQVE GAELWIAGNG PERTRLERQV ADAGLGDRVR
FLGDVADEDL PALYRQADIF VLPSHLRAEA FGIVLVEALA SGLPCISTAL GTGTDFVNVH
NETGLVVPPG DATALAEAIR RLRDDPALRA RYGQAAVHRA RTLFSRERML DAVERVYRQV
VRERGQA