Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2548 |
Symbol | |
ID | 5209517 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 3160188 |
End bp | 3161291 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640596152 |
Product | glycosyl transferase, group 1 |
Protein accession | YP_001276874 |
Protein GI | 148656669 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.742963 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.196776 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCATATCC TTCACATCTA CAAAGACTAC CCGCCGGTAC TGGGGGGTAT TGAGGGACAC GTGCGCGACC TGGCGGAGGG ACTGGTTGCG CGCGGGTATC AGGCAACGGT GCTGGTGACC AGTACGGATC GCGGCACCTC GATTGAGCGA CCGTCGCCGG GTCTGACCGT GATCCGGGCG GCGCGGATGC TGCACCTGGC ATCGACGCCG CTCAGCCCGG CGATGATTGC GCTGGCGCGG GGCATTCGCG CCGACATTGT TCACCTGCAG TTTCCCTACC CGCCGGGTGA CCTGGCAGCG CTGGCAGCGC CTGGATCGCC GCCGCTCGTC ATTTCGTACC AGAGCGATAT TGTGCGCCAA AAAACGCTGT TGCGCCTCTA CCGACCGTTG CTGGCGCTGA CCTTGCGACG CGCAGCGCGG ATCATCACGT CCAGTCCTGG GTACATCGCC TCATCGCCGT TTCTTCGCCC CTATGCCGCA AAATGCGAGG TTGTTCCGAT TGGCGTCGAT GTCACGCGGT TCACTCCCAA CGACAGGCGC GCCAACGCCG TGCCGCGCCT GCTCTTCGTC GGACGACTGC GGTACTACAA GGGGCTGCAT TTCCTGATAG AGGCGCTGCG ACAGGTCGAA GGGGCGGAAC TCTGGATTGC CGGGAACGGT CCAGAGCGCA CGCGACTGGA GCGACAGGTT GCCGATGCCG GGTTGGGTGA TCGGGTGCGC TTTCTCGGCG ATGTGGCGGA TGAGGACCTG CCCGCGCTCT ACCGGCAGGC GGATATCTTT GTGCTCCCAT CGCACCTGCG CGCGGAAGCG TTCGGCATTG TGCTGGTCGA AGCGCTGGCG AGCGGGTTGC CGTGCATCAG CACCGCGCTC GGAACCGGCA CCGATTTTGT GAACGTCCAC AACGAGACAG GGCTGGTTGT TCCGCCAGGC GATGCGACGG CGCTGGCGGA GGCAATCCGA CGCCTTCGGG ACGACCCGGC GCTGCGTGCA AGGTATGGTC AGGCAGCCGT ACATCGCGCG CGGACACTCT TCTCACGCGA GCGCATGCTG GATGCGGTAG AGCGGGTCTA TCGTCAGGTG GTGCGCGAGA GAGGTCAAGC CTGA
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Protein sequence | MHILHIYKDY PPVLGGIEGH VRDLAEGLVA RGYQATVLVT STDRGTSIER PSPGLTVIRA ARMLHLASTP LSPAMIALAR GIRADIVHLQ FPYPPGDLAA LAAPGSPPLV ISYQSDIVRQ KTLLRLYRPL LALTLRRAAR IITSSPGYIA SSPFLRPYAA KCEVVPIGVD VTRFTPNDRR ANAVPRLLFV GRLRYYKGLH FLIEALRQVE GAELWIAGNG PERTRLERQV ADAGLGDRVR FLGDVADEDL PALYRQADIF VLPSHLRAEA FGIVLVEALA SGLPCISTAL GTGTDFVNVH NETGLVVPPG DATALAEAIR RLRDDPALRA RYGQAAVHRA RTLFSRERML DAVERVYRQV VRERGQA
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