Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2543 |
Symbol | |
ID | 5209512 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 3145961 |
End bp | 3146377 |
Gene Length | 417 bp |
Protein Length | 138 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640596147 |
Product | hypothetical protein |
Protein accession | YP_001276869 |
Protein GI | 148656664 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.299266 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0921107 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCATTGC TCATCGAACT GACGATCATC GTGGCATCTG CCGCGCTTCT CTGCATCTAC GTCGGATGGG GTGTGGCGCG CCTTGCGCTG CCGCCATCGC TGATGCCGTT CCGCGCTCCG TTGACGCCGC TGGTCGGCTA TGCAACGGTA CTCTGGGTCG GGTTCATACT GGCGAGCCTG GCATTGAACC TGCGCTGGAC GCTGGTGGTT CTTCTGGCAG GCGCGACCAT GCTCAATGTC CTCGCCTGGC GCGCCGAAGG ACGACCGCGA CCGCTGACGT GGCTGCGCGC GCAGCCGGAG GCGCTGATTC CGCCGCTGCT GGCGCTGTTG ACCGGCATTC TGCCTCTGCT GAGTTACGGA TACCTGACTA TCATCGGGCG TTGGGGCGAA CAGGATCGTT CTTCGGCGCA CTGTTGA
|
Protein sequence | MPLLIELTII VASAALLCIY VGWGVARLAL PPSLMPFRAP LTPLVGYATV LWVGFILASL ALNLRWTLVV LLAGATMLNV LAWRAEGRPR PLTWLRAQPE ALIPPLLALL TGILPLLSYG YLTIIGRWGE QDRSSAHC
|
| |