| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2539 |
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| Symbol | |
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| ID | 5209508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 3134439 |
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| End bp | 3137348 |
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| Gene Length | 2910 bp |
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| Protein Length | 969 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640596143 |
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| Product | helicase domain-containing protein |
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| Protein accession | YP_001276865 |
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| Protein GI | 148656660 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000371025 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000313651 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACCAACC CCGGCTCAAT TGTACGGTTC CGTCAGCGGT TGTGGGCGCT GCTCCCCTCG
GCATCCCCCG ATCACGTGAC GCTGCGCCCG CTCACCGGCA GTGATGATGA GACCCTGACT
CTCTACCGTC GCCTGATCGA CCTGATCGGC TATACGTTGC CTTCGGAACG TATCACGCCA
GCTGCGTTTC CTCCGCCGGA CGCCGACCAC GTTGCTGACG CTGCCAGCGC GCATCTGCTC
TGGCAGGCGG CCCGCCTGTC GCTGCGTGAA GGCGCCACGC CGTTTCGTTC GCTTGGACGC
ATCTCGATCC GTCCGCGCAC CTATCAGTTT GTGCCGCTCC TGATGGCGCT GCGCCTCGAT
CCGGTGCGAT TGTTTATCGC CGATGACGTC GGTGTGGGGA AGACCATCGA GGCGCTGCTG
GTTGCCCGTG AACTGCTCGA CCGCGGTGAG ATCGGTCGGT TCTGCGTCCT CTGTCCGCCC
GCGCTGTGTG AGCAGTGGTC AAAAGAACTG GCGGAGAAGT TCAACCTGGA CGCGGTGATC
GTCCGCTCTG GCACGGTCAG CCAGCTGGAG CGCCAGGTTC CTCCCGGCGC AACGATCTAT
GAGTCGTTCC CGGTGCAGGT GATCAGCATC GATTTTGTCA AAACCGAGCG GAATCGCCAC
CAGTTTCTTC AGTTTTGCCC CGATCTGGTG ATCGTTGACG AGGCGCACGG CGCAGCGGCG
GCGCAGGGGC GCGGTCAGCA GGAGCGCCAT GCCCTGGTGC AGGATGTCGC CAGGAAGCCG
CGGCGCCACC TCATCCTGCT GACCGCCACG CCGCACTCCG GTATCGAGGA GGCATTCCGA
TCACTCCTGG GGCTGGTGCG TCCTGAGTTC GCCGACTGGC GCCTCGATGC GTTGAGTGAT
GCGCAACGCA GCGAACTGGC GCGCCACTTC GTGCAGCGCA CCCGCCGCGA CATCGAGCAG
GGGTGGGAAG CGATCACCTG TTTCCCGCAG CGCGAACCGC AGGACGAGAC CTACGAATTG
TCCGATGGCT ACCGTCGTCT CTTTGAGCGC ACCTATCAGT TTTGTTTCGA GATCGTGCAG
ACCGGTGAAC ACCTCGACGC GCGCCGCCGT CGGGTGCGAT CCTGGGGCGC GCTCTCGCTC
CTGCGCTGCG TGATGTCGAG TCCGGCAGCA GCGGTTGCGA CCCTCGCCAG CCGTGGCGCG
CTGGTGTTTG ATAGCGATGA AGAGGCGGAT TTCCGTCCAT TTGTGTTTGA AGTGACCGAA
GAACGCGCAA CGGACGAGTC GCCGACACCG CCGCTGGAAG CGACGGTCGA AACATTACCG
GACGCCGACC GGCGGCGGTT GCGCGACCTG GCGCGGCTGG CGCGCGACCT CTACGGATCG
GAGCACGACG CCAAACTGCG CCGCGCTGTC GAGTTAACGC GCCACCTGAT CGATGAAGGC
TTCCACCCGA TCCTCTGGTG TCGCTACGTC GCCACCGCAG AGTATGTCGC CGATCAGGTG
CAGCGCGATC TGCCCGATGG TGTCCAGGTT GCGTGTGTGA CCGGGCGGAT GGGGGACGAA
GAGCGGCAGG CGCGAATTGC GGAACTGGAC GCCGACCGTC CGCGGGTGCT GGTGGCAACC
GATTGTCTCT CCGAAGGGGT CAACCTCCAG TCGCTGTTCA CCGCCGTGGT GCATTACGAT
CTGCCCTGGA ACCCGAATCG CCTGGAGCAG CGCGAAGGGC GCGTGGATCG CTACGGGCAA
CCGGCGCCGC GTGTCAGGGT CATCCGTTTT TTCGGGCGCG ACAATCCGGT GGATGGCGCG
GTGCTCGATG TGCTGCTCAA CAAAGCGCGC ACGATCCATC GCACCCTCGG CACGTATGTG
CCGGTGCCGG AAGAGAGCGA GAGCGTCACC CAGGCGGTGC TCGAAGCGCT GTTCCTCCGG
GGTCGGCGCA CGCCAGGCGC ACAACTCACC CTCGACCTGG GCATACCGGC GGTTGAAGAG
TTGCACCGAC GCTGGGATCG CGATGTGGAT CGCGAGCGGG TCAATCGCAC CCGGTTCGCT
CAGCGCGCGC TGAAACCCGA AGAAGTGCAG CGTGAACTCG AAGCGACCGA CGCAGTGCTC
GGCGATCCGT CCGCCGTGCG CGATTTTGTG CTGGAAACCG CCCAACGCCT CAACCTGCCG
ATCACGCCAG ACCCGAGGCG CGCGGATGTT TTCCGCGTCA GCCTGGCGCC GGATGTGCTG
CGTGCTCTGC CCGATGCTAT TCGCATGGAA CTGCCCGACT CTTCGTCGTC CGCCGCGCGC
CGCGCCAACC CCTTCTGGTC GATCAGTTTC ATTTCGCCGA CGCCGGAGGG TGCGGAGTAT
GTCGGGCGCA ACCACCGCTT CGTCATGGCG CTGGCGCAGT TCCTCTTCGA AGAGGCGCTG
GAACGATCCG AGACGGCGAT TGCCCGGCGC TGCGGCGCGA TCCGCACGCA CGCGGTGCAG
GAAACGACGA CCATCCTGCT GCTGCGGGTG CGCTACATGC TCGAATATCC CAACGCTCAA
CCCGTGCTGT CCGAAGAAGT GCTGGCGCTC GGCTACCGCG ACCATGGCAG CGAGATGCAC
TGGCTCGACC ATGGCGAAGC GCTGAGTCTC CTGGCGTCCG CCCGACCCGC CGCCAACATG
CCGCTGGAAG AAAAGCAGAC CATCCTGCGT CAGGCGCTCG CGCGCATTGG TGAATGGCGC
CCGGTGCAGG GAGGAAGATG GGGCGACGAC CATCCGATCC AGTCCGGCAT CCGGCAGTGG
ATCGACCGTC GCGCCGCCGA CCTGACCGAA GCGCACAAAC GCATCCGCCA GGCAGTGGCG
CTGCGGGTGC GCGGGCTTGA GATGACGCCG CAGTTCCCGC CCGATCTGCT GGGAGTGGTC
GTACTGGAAC GCGCCAACAC ACGCCTATGA
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| Protein sequence | MTNPGSIVRF RQRLWALLPS ASPDHVTLRP LTGSDDETLT LYRRLIDLIG YTLPSERITP
AAFPPPDADH VADAASAHLL WQAARLSLRE GATPFRSLGR ISIRPRTYQF VPLLMALRLD
PVRLFIADDV GVGKTIEALL VARELLDRGE IGRFCVLCPP ALCEQWSKEL AEKFNLDAVI
VRSGTVSQLE RQVPPGATIY ESFPVQVISI DFVKTERNRH QFLQFCPDLV IVDEAHGAAA
AQGRGQQERH ALVQDVARKP RRHLILLTAT PHSGIEEAFR SLLGLVRPEF ADWRLDALSD
AQRSELARHF VQRTRRDIEQ GWEAITCFPQ REPQDETYEL SDGYRRLFER TYQFCFEIVQ
TGEHLDARRR RVRSWGALSL LRCVMSSPAA AVATLASRGA LVFDSDEEAD FRPFVFEVTE
ERATDESPTP PLEATVETLP DADRRRLRDL ARLARDLYGS EHDAKLRRAV ELTRHLIDEG
FHPILWCRYV ATAEYVADQV QRDLPDGVQV ACVTGRMGDE ERQARIAELD ADRPRVLVAT
DCLSEGVNLQ SLFTAVVHYD LPWNPNRLEQ REGRVDRYGQ PAPRVRVIRF FGRDNPVDGA
VLDVLLNKAR TIHRTLGTYV PVPEESESVT QAVLEALFLR GRRTPGAQLT LDLGIPAVEE
LHRRWDRDVD RERVNRTRFA QRALKPEEVQ RELEATDAVL GDPSAVRDFV LETAQRLNLP
ITPDPRRADV FRVSLAPDVL RALPDAIRME LPDSSSSAAR RANPFWSISF ISPTPEGAEY
VGRNHRFVMA LAQFLFEEAL ERSETAIARR CGAIRTHAVQ ETTTILLLRV RYMLEYPNAQ
PVLSEEVLAL GYRDHGSEMH WLDHGEALSL LASARPAANM PLEEKQTILR QALARIGEWR
PVQGGRWGDD HPIQSGIRQW IDRRAADLTE AHKRIRQAVA LRVRGLEMTP QFPPDLLGVV
VLERANTRL
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