Gene RoseRS_2527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2527 
Symbol 
ID5209496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp3123256 
End bp3124704 
Gene Length1449 bp 
Protein Length482 aa 
Translation table11 
GC content60% 
IMG OID640596132 
Productmonogalactosyldiacylglycerol synthase 
Protein accessionYP_001276854 
Protein GI148656649 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0707] UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0493544 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAACATC GCGTCCTTAT TCTCTCCACC AGCGCCGGTT CCGGGCACAA ATCCGCCGCA 
GCCGCGCTCG AGAAGGTCTT TCAACGTTCG CCGCAGGTCG AAGAACTCGT CAATCTCGAT
GCGCTCGAAC GCACCAACGA ACTGTACCGC GCCTTCTACT CCGATCTCTA CCTGCGGTTG
GTGCAGGAGC GTCCGCAACT CGTCGGTTGG TGGTATCAGG CGAGCGACGA ACCGTGGAAG
ACCGACACCT TCCGCCTGCT GTTCGACCGG ATCAACGCCG ACCCGCTGAC CCGCTTCATT
CGCGAGTTCC GTCCCACGAT CACCGTCTGC ACTCACTTCA TGCCCGCCGG CATCGTGGCG
CAGTTGCTAG CAGAAGACGC CATCGACACC CGGCTGGCAA TTGTGACCAC CGATTACGAC
TTCCACTCGA TGTGGCTCAG TCCGAGATTC AATCGCTACT TTGTCGCGCT GGAAGAAACA
AAGGTGCATC TGATGGCGCT CGGACTGCCG GAGGATCGCA TTACCATCTC CGGCATCCCG
GTCGATCCCG CTTTCGAGGC GCCGATCAAC CGCGACGAGG TCCTGGCGCA CTACCACCTG
CGCCCCGACC TGCCGATGAT CCTGGTGTCG GCAGGTGCAG CGGGCATTGG TCCAGCGCGC
GACGTGGTGC AGCAGATCAT GACGATGAAG ACGCCATCAC AGGTCATTGT GGTATGCGGC
AGGAATGAAG AACTGCGCAA AGAACTCATT GAATTGACCG AACCGCAGGC GAAACGCTTC
CGTTTACTGG GATTCACCGA CGATATGCCA TCGCTGATGA AGATCGCAAC GATCCTGATC
GGTAAGCCGG GCGGATTGAC TTCTTCTGAA GCCATGGCTG CCGGATTGCC GATGGTCATC
ATCTCGCCTA TTCCCGGTCA GGAAGAGCGC AACAGTGATC ACCTTCTCGA AGAAGGGGTG
GCGCTGCGCT GCAATCAGAT GACCACCCTT GCCTACAAAG TTGATCGTCT GTTGCAGAAC
CCCGAACGCC TGGCGCGTAT GCGCGAAAAC ACCCGCAACA TTGGACGTCC CGACGCTGCG
CGCGTGATTG TCGATACATT GCTCCACGAA GTGAACGAGC CGGTGGTGAT CGAGGAGTCG
CCGCCGATCA GGATTCTGCC ATTTCGTATC AATCTCGCCG ACCTGTTTGA CCCGCCGCTG
GCGGACGATG ACCGGTTCAC CATTGTCGAT GCGCTGAGCG GCGAGCTGAT CGACGAAGTG
ACCGGCAAAG AGATGCGCGT CCTGTTCGAC AACCTGGAGA TCGAGAGCAC CACCGACGCC
GATTTCTACA TCAACCGCGA TACCCTGGCG CTGCTCGCCG ATCGCGGCGC GAGTCCGCAC
CTGATTGACG TGTTGCAGCG CGCCCTCGGC AACCGCGACG AGTGCGACAT CCGCTGGCGA
CGCCAGTAG
 
Protein sequence
MKHRVLILST SAGSGHKSAA AALEKVFQRS PQVEELVNLD ALERTNELYR AFYSDLYLRL 
VQERPQLVGW WYQASDEPWK TDTFRLLFDR INADPLTRFI REFRPTITVC THFMPAGIVA
QLLAEDAIDT RLAIVTTDYD FHSMWLSPRF NRYFVALEET KVHLMALGLP EDRITISGIP
VDPAFEAPIN RDEVLAHYHL RPDLPMILVS AGAAGIGPAR DVVQQIMTMK TPSQVIVVCG
RNEELRKELI ELTEPQAKRF RLLGFTDDMP SLMKIATILI GKPGGLTSSE AMAAGLPMVI
ISPIPGQEER NSDHLLEEGV ALRCNQMTTL AYKVDRLLQN PERLARMREN TRNIGRPDAA
RVIVDTLLHE VNEPVVIEES PPIRILPFRI NLADLFDPPL ADDDRFTIVD ALSGELIDEV
TGKEMRVLFD NLEIESTTDA DFYINRDTLA LLADRGASPH LIDVLQRALG NRDECDIRWR
RQ