Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2521 |
Symbol | |
ID | 5209490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 3115953 |
End bp | 3117173 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640596126 |
Product | tryptophan synthase subunit beta |
Protein accession | YP_001276848 |
Protein GI | 148656643 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0133] Tryptophan synthase beta chain |
TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.195763 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGTCGA GCGTGCATCA GGATCCGACC ATTGATACTG TCCGATCCGG TCGTTTTGGT CCCTACGGCG GCGCCTACAT TCCCGAAACG CTGGCAACGT CAGTTACGGC GCTCGAGCAG GCGTATGCGG CTGCGCGTCA GGACCCCGCC TTCTGGGCGG AACTGGATCG TCTGCACCGC AGTTATACCG GGAGACCGAC ACCGCTCACC TTCGCCCGGC GTCTGACGGA ATACCTTGGC GGAGCGCAGA TCTATCTCAA GCGAGAAGAC CTGGCGCACA CCGGCGCGCA CAAGATCAAC AATGCGCTCG GTCAGGGGTT GCTGGCAAAA CGTATGGGCA AAAGGCGGAT CATCGCCGAA ACCGGCGCCG GGCAGCATGG TGTTGCGACG GCGACTGTGT GCGCCCTGCT GGGGATGGAA TGTGTGGTCT ACATGGGTGT CGATGACATG GCGCGCCAGC AACCGAATGT TTTCCGCATG CGCCTGCTGG GTGCGGAGGT GCGTGGGGTC GCCAGCGGCT CCCGTACCCT TAAGGATGCC ATCAACGAAG CCATGCGCGA CTGGGTGACC AATCCGGACT CCTATTATCT GCTCGGTTCG GCGCTCGGTC CGCATCCGTA CCCGACCATG GTGCGCGACT TTCAGAGCAT CATCGGACGA GAGGCGCGCG AACAGATTCT TGCGGCGACC GGGCGTTTGC CCGATGTTGT GCTGGCATGC GTTGGCGGCG GCTCGAATGC CATCGGCATC TTCAGTGCGT TCATTGCCGA TGAAGGGGTT GAACTGCGCG GCGTTGAGGC AGGGGGACGC GGTACGACCC TTGGTGACCA CGCCGCGCGC TTCTCCGGCG GGCGACCGGG AGTGTTGCAG GGAACCTACA CGTATGTGTT GCAGAACGAC GATGGGCAGA TCGGATTGAC GCACAGCATT TCGGCTGGTC TCGACTATGC TGCGGTTGGA CCGGAGCACG CGCTGCTTCA CGATCAGGGG CGCGCCACCT ACACCACAGC CGATGACGAA GAAGCGCTCG ACGCCTTTCA GACGCTGGCG CGACTCGAAG GGATCATCCC GGCGCTGGAG AGCGCTCACG CGGTAGCCGA AGCGATCAAG ATCGCGCCTG CCATGCGCCC GGATCAGATC ATCCTGATTA ACCTGTCGGG GCGCGGTGAC AAAGACATTT TCACTGTTGC GCGGGCGCTG GGAGTGGAGG TTGGGGGTTG A
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Protein sequence | MTSSVHQDPT IDTVRSGRFG PYGGAYIPET LATSVTALEQ AYAAARQDPA FWAELDRLHR SYTGRPTPLT FARRLTEYLG GAQIYLKRED LAHTGAHKIN NALGQGLLAK RMGKRRIIAE TGAGQHGVAT ATVCALLGME CVVYMGVDDM ARQQPNVFRM RLLGAEVRGV ASGSRTLKDA INEAMRDWVT NPDSYYLLGS ALGPHPYPTM VRDFQSIIGR EAREQILAAT GRLPDVVLAC VGGGSNAIGI FSAFIADEGV ELRGVEAGGR GTTLGDHAAR FSGGRPGVLQ GTYTYVLQND DGQIGLTHSI SAGLDYAAVG PEHALLHDQG RATYTTADDE EALDAFQTLA RLEGIIPALE SAHAVAEAIK IAPAMRPDQI ILINLSGRGD KDIFTVARAL GVEVGG
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