Gene RoseRS_2521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2521 
Symbol 
ID5209490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp3115953 
End bp3117173 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content62% 
IMG OID640596126 
Producttryptophan synthase subunit beta 
Protein accessionYP_001276848 
Protein GI148656643 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0133] Tryptophan synthase beta chain 
TIGRFAM ID[TIGR00263] tryptophan synthase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.195763 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTCGA GCGTGCATCA GGATCCGACC ATTGATACTG TCCGATCCGG TCGTTTTGGT 
CCCTACGGCG GCGCCTACAT TCCCGAAACG CTGGCAACGT CAGTTACGGC GCTCGAGCAG
GCGTATGCGG CTGCGCGTCA GGACCCCGCC TTCTGGGCGG AACTGGATCG TCTGCACCGC
AGTTATACCG GGAGACCGAC ACCGCTCACC TTCGCCCGGC GTCTGACGGA ATACCTTGGC
GGAGCGCAGA TCTATCTCAA GCGAGAAGAC CTGGCGCACA CCGGCGCGCA CAAGATCAAC
AATGCGCTCG GTCAGGGGTT GCTGGCAAAA CGTATGGGCA AAAGGCGGAT CATCGCCGAA
ACCGGCGCCG GGCAGCATGG TGTTGCGACG GCGACTGTGT GCGCCCTGCT GGGGATGGAA
TGTGTGGTCT ACATGGGTGT CGATGACATG GCGCGCCAGC AACCGAATGT TTTCCGCATG
CGCCTGCTGG GTGCGGAGGT GCGTGGGGTC GCCAGCGGCT CCCGTACCCT TAAGGATGCC
ATCAACGAAG CCATGCGCGA CTGGGTGACC AATCCGGACT CCTATTATCT GCTCGGTTCG
GCGCTCGGTC CGCATCCGTA CCCGACCATG GTGCGCGACT TTCAGAGCAT CATCGGACGA
GAGGCGCGCG AACAGATTCT TGCGGCGACC GGGCGTTTGC CCGATGTTGT GCTGGCATGC
GTTGGCGGCG GCTCGAATGC CATCGGCATC TTCAGTGCGT TCATTGCCGA TGAAGGGGTT
GAACTGCGCG GCGTTGAGGC AGGGGGACGC GGTACGACCC TTGGTGACCA CGCCGCGCGC
TTCTCCGGCG GGCGACCGGG AGTGTTGCAG GGAACCTACA CGTATGTGTT GCAGAACGAC
GATGGGCAGA TCGGATTGAC GCACAGCATT TCGGCTGGTC TCGACTATGC TGCGGTTGGA
CCGGAGCACG CGCTGCTTCA CGATCAGGGG CGCGCCACCT ACACCACAGC CGATGACGAA
GAAGCGCTCG ACGCCTTTCA GACGCTGGCG CGACTCGAAG GGATCATCCC GGCGCTGGAG
AGCGCTCACG CGGTAGCCGA AGCGATCAAG ATCGCGCCTG CCATGCGCCC GGATCAGATC
ATCCTGATTA ACCTGTCGGG GCGCGGTGAC AAAGACATTT TCACTGTTGC GCGGGCGCTG
GGAGTGGAGG TTGGGGGTTG A
 
Protein sequence
MTSSVHQDPT IDTVRSGRFG PYGGAYIPET LATSVTALEQ AYAAARQDPA FWAELDRLHR 
SYTGRPTPLT FARRLTEYLG GAQIYLKRED LAHTGAHKIN NALGQGLLAK RMGKRRIIAE
TGAGQHGVAT ATVCALLGME CVVYMGVDDM ARQQPNVFRM RLLGAEVRGV ASGSRTLKDA
INEAMRDWVT NPDSYYLLGS ALGPHPYPTM VRDFQSIIGR EAREQILAAT GRLPDVVLAC
VGGGSNAIGI FSAFIADEGV ELRGVEAGGR GTTLGDHAAR FSGGRPGVLQ GTYTYVLQND
DGQIGLTHSI SAGLDYAAVG PEHALLHDQG RATYTTADDE EALDAFQTLA RLEGIIPALE
SAHAVAEAIK IAPAMRPDQI ILINLSGRGD KDIFTVARAL GVEVGG