Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2512 |
Symbol | |
ID | 5209481 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 3107296 |
End bp | 3108318 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640596117 |
Product | ROK family protein |
Protein accession | YP_001276839 |
Protein GI | 148656634 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | [TIGR00744] ROK family protein (putative glucokinase) |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.615457 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.876353 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCATTGCA AAATCTTCAA AATAGAGAAG AAAATGAGTG TCTACCTCGG CATCGATCTG GGCGGCACCA AGATCGCCGC AGCCGCCGTT GATGTACGCA CCGGCGAGCG CCTGCTGCAA CTGATTGTCC CCACCGAAGC CCACGAGGGA CCGGCGGCGG TCATCGAGCG CATGGCAGCG CTGGCGGCAC AGGTTTGCAC TCAAGCCAAT GTTGCGCTCG AACATATTCC GGCGATTGGC ATTGGCGTAC CCGGCGTCAT CGATCTGGAG CGCGGAGTTA CAGTGTTGCT ACCCAATCTG CCATCAGGCT GGCGGAATGT TCCGCTCGCC GCCAACATTA CTCATCTTAC CGGTCGCCCG ACGGCAATTA TCAATGATGC GCGCGCGTTT ACCCTGGCGG AGGCGACCTT TGGCGCCGGG CGCGATGCGT CCAGCGTCGT CGGCATCACG CTGGGCACCG GCATTGGCGG CGGTATTGCG TTCAATGGGC GACTGCACCT GGGCATCGAC GGCACTGCTG GCGAGGTCGG GCATATGACG ATCGACCCGT ACGGACCGCG CTGCGGCTGC GGCAACCGGG GCTGCCTGGA GACATTCGCC AGCGGTCCTT CGATCACGGC GATGGGGTTG CGCGCTGTTG CCCAGGGAAT GACAACCCAG ATCGGCGCGC TGGTGGACTA TGATCTGAAC AAGATCACGC CCGGCGTCAT TGCGCGCGCC GCCGAGAATG GCGACACGGT TGCGCGCGAG ATCCTTCAGC GCGCCGGGAG TTATCTCGGC ATCGGCATCG CCAACCTGAT CACGATCTTC AGCCCCGAAC GTGTCGTGAT CGGCGGCGGA CTGTCGCGCC TGGGTGAGTG GCTTCTCGAA CCGGCGCGCG CTGAGGTGAC AGCGCGTTGC CATCTCACTC CGCTCGATCG CGTTCAGATT ATGCTGGCGC AACTGGGCGG CGAGGCGGGC GTGATCGGCG CAGCAGTGTG GGCAGCGCAA CGCTACCCTG CATGGTCAAT GGACGTTCGG TGA
|
Protein sequence | MHCKIFKIEK KMSVYLGIDL GGTKIAAAAV DVRTGERLLQ LIVPTEAHEG PAAVIERMAA LAAQVCTQAN VALEHIPAIG IGVPGVIDLE RGVTVLLPNL PSGWRNVPLA ANITHLTGRP TAIINDARAF TLAEATFGAG RDASSVVGIT LGTGIGGGIA FNGRLHLGID GTAGEVGHMT IDPYGPRCGC GNRGCLETFA SGPSITAMGL RAVAQGMTTQ IGALVDYDLN KITPGVIARA AENGDTVARE ILQRAGSYLG IGIANLITIF SPERVVIGGG LSRLGEWLLE PARAEVTARC HLTPLDRVQI MLAQLGGEAG VIGAAVWAAQ RYPAWSMDVR
|
| |