| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2508 |
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| Symbol | |
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| ID | 5209477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 3101346 |
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| End bp | 3102509 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640596113 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001276835 |
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| Protein GI | 148656630 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.844584 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATTC CAGTTTCACC CCAGCCAGCT ACGATGAAGC AGATCGAACA GGAACGCCGC
TCCTTCGAGC AGCAGCGTCG GCGCATCTAC CGCGTTGCAG GAGTGCTCGG TATGCTGGCG
ATCCTGTATA CGCAGTACAT TATCTACATC GGAACCGAAG AGTCCCCGCT GTACGAAATC
ATCTACACCA TCAACCATAT TGCGTTTGCC GGCGTTTGCT TTGCAATTGT CTGGACGCTG
GGACAGCAAC AGATACCGCT GGAGCGCGTC GAACGGTTCA TGCTCTTCTT TTTCATCTTC
CAGTCGCTTG TCTTCAACAG CATCGTTCCG GCGTTGTTGC GCCAGCATCT CGACAATCTC
TTTCTTGACA CGATTGGCGA CGACATCTGG TTTCTGCTGA TCGTCTGCGT GCTGGCGGTT
CACCTCTATG ATCTGCGGCG TGGCGCATTG ATTGCCGGAA TCGTGTATAG TCTGTCCTTT
GCGATTGTCG TAGTGCAGAT CGTGTCCTGG AATATGCCCG GCATCGACGG CGAGGACAGT
GAACATGTCC TCAGAGCCTA TCTGATGGGA GGTGCATTGC TGGTGTTTCT GGTCGTCCTG
GCGATGTACC GTTCGCATAT CGAGCGTCTC CACACCGAAT ACGAGGTTAT GGCGAATCTC
GCCTATACCG ATACCCTGAC CAGCCTGCCC AACCGCCGTC GTCTGTACGA AGATGTGTAC
CGCCTGATCG CACTGGCGGA ACGGTATGGG CAGGAGTTCT GCGTCTGTCT GTTCGATCTG
GACCACTTCA AGCGCCTGAA TGACACCCAT GGTCATCTGG TCGGCGATCA GGTGTTGCAG
GAAGTGGCGC AGGTGGCGCG GCTGCATCTG CGCGCTGCTG ATCTCTTCGG GCGCTGGGGC
GGCGAAGAGT TCGTCGTCCT GCTGCCGCAA ACACGTCTCA ACGATGCGCA GACGGCGCTG
GAGCGGGTGC GTCTGGCGCT GCACACTATT GCTCTCCCCA ATGTGCACGC TATCACCGCA
AGCTTTGGCA TCGCAGCGTA TCTTCCCGGC GATACCTCCG AATCACTCCT GCACCGCGCC
GATCAGGCGT TATACCTTGC CAAAGCCACC GGGCGCAACC GGATCGTTCT GGACAGCGAT
CCGGTCGAGG CGTGGGGTGT ATAG
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| Protein sequence | MDIPVSPQPA TMKQIEQERR SFEQQRRRIY RVAGVLGMLA ILYTQYIIYI GTEESPLYEI
IYTINHIAFA GVCFAIVWTL GQQQIPLERV ERFMLFFFIF QSLVFNSIVP ALLRQHLDNL
FLDTIGDDIW FLLIVCVLAV HLYDLRRGAL IAGIVYSLSF AIVVVQIVSW NMPGIDGEDS
EHVLRAYLMG GALLVFLVVL AMYRSHIERL HTEYEVMANL AYTDTLTSLP NRRRLYEDVY
RLIALAERYG QEFCVCLFDL DHFKRLNDTH GHLVGDQVLQ EVAQVARLHL RAADLFGRWG
GEEFVVLLPQ TRLNDAQTAL ERVRLALHTI ALPNVHAITA SFGIAAYLPG DTSESLLHRA
DQALYLAKAT GRNRIVLDSD PVEAWGV
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