Gene RoseRS_2502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2502 
Symbol 
ID5209471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp3092796 
End bp3093959 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content61% 
IMG OID640596107 
Productglycosyl transferase, group 1 
Protein accessionYP_001276829 
Protein GI148656624 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.417702 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGATTG CCATTTTCAC GGAGACCTTT CTGCCCAAGA TCGATGGCGT GGTCTCGGTT 
CTATGCCTGG CGCTCCAACA TCTGCGCGAT AAGGGTCACG AGGTTCTTCT GTTCGGTCCG
CCCGACATGC CCGAAACCTA CGCCGGTCAT CGTCTGGTGC GCACCGGCGG ACCACGCTTC
TGGCTCTACC CGGAACTGCG GATCAACCTG CCGAGCGGCA AAATCGTGCG CGAACTCCGC
GCATTTCAGC CCAACGTTGT GCATGTCGTC AACCCGGCAT TTCTCGGACC CACCGGTATT
GCGCTGGCGA AATGGTTCGA CCTTCCGCTC GTCGCTTCGG CGCATATGGA TATTACCAGT
TACACGACCC ATTATGTGGG AGCGTGGGGC GTGCCTATCG CCTGGTGGCT CTTCCGTACC
GGACACAATT TTGCCGATCT GAACCTGGTT CCTTCCAGTG CGATGCTGCA CAAGGTGCGC
GAACGCGGGT ACCGCCGTGT GCGCTGGTGG CATCGCGGTG TTGATACCGA GCGATTCCGC
CCCGACTTTC GCAGCGCTGC GATGCGTGAG CGACTCAGCG GCGGTCACCC CGATGATTTT
CTGGCGGTGT ACGTCGGGCG GATCACGCGC GAGAAAAATG TCCATCTGCT GCGCGATGCG
ATCTGCGGGC TGGAAGGGGT GCGCCTGGCG CTCGTCGGTG GCGGACCTGA ACTGGAACAG
ATGCAGGCGT ACTTCGCCGG TACAGGAACG GTCTTCACCG GTTATTTGCG TGGCGATGAC
GTTGCCAGGG CATATGCGTC GGCGGATGTG CTGGTCTTTC CTTCGACCAG CGAAACATTC
GGCATGGCGC CGCTCGAAGC GATGGCGTGC GGGCTGCCGG TGGTCGGCTC GTTGACCGGC
GGGCTGGTCG ATACGCTGCG AGATGGGGTT AATGCGCTGG TCTACGATCC GGACGATCCG
TTGCAGATCC GGGAACGGGT ACGACAGCTC CGCGATTCAC CCGCGCTGCT GGCACAGTTG
CGTCAGGGCG CTCTCGAACA TGCGCGCAGC CGTTGCTGGC AGGCGACGAT GGATCAACTG
ATCGGGTACT ACGAACTGGG AATCCGCTAC CATCGCCAGT CGAAAGTACG GCGTCGGCTG
CGGTTGATTC GTGCACCGGT ATGA
 
Protein sequence
MRIAIFTETF LPKIDGVVSV LCLALQHLRD KGHEVLLFGP PDMPETYAGH RLVRTGGPRF 
WLYPELRINL PSGKIVRELR AFQPNVVHVV NPAFLGPTGI ALAKWFDLPL VASAHMDITS
YTTHYVGAWG VPIAWWLFRT GHNFADLNLV PSSAMLHKVR ERGYRRVRWW HRGVDTERFR
PDFRSAAMRE RLSGGHPDDF LAVYVGRITR EKNVHLLRDA ICGLEGVRLA LVGGGPELEQ
MQAYFAGTGT VFTGYLRGDD VARAYASADV LVFPSTSETF GMAPLEAMAC GLPVVGSLTG
GLVDTLRDGV NALVYDPDDP LQIRERVRQL RDSPALLAQL RQGALEHARS RCWQATMDQL
IGYYELGIRY HRQSKVRRRL RLIRAPV