| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2499 |
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| Symbol | |
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| ID | 5209468 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 3088514 |
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| End bp | 3091387 |
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| Gene Length | 2874 bp |
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| Protein Length | 957 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640596104 |
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| Product | protein serine phosphatase with GAF(s) sensor(s) |
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| Protein accession | YP_001276826 |
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| Protein GI | 148656621 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2203] FOG: GAF domain
[COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.628106 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.769914 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTCTAC CTGTGAAAGA CCAAATTGCC GAATTGCAAC AGGAACTCGC AGCGCTGCGC
ATCGACCGGG AACGTAACCT TCGTGCGCTT GACATTATTC GCAACGTCAG CATCGCGTGC
CTGGGACGAG TCAGCGCACG TGCGATTTTT GAAGCCATTC ACCGTGAACT TTTGCCGGTG
TTTCATTACG ATGCCGCGTA TTTTGCCGTT TGCGATCCTT CCAACCGCGA AACATTTCGG
GCAGCGCTGC TCGTCGATGA AGAGAGCGTT GAGTATCTGG AGAATACGCC GTATGGACCG
CTCACAGGTT TGATGGTGCG GGAGCGCAAG CCGTTACTGG TCCGGGATCT GGAGCGGGAG
CGCGACTCGC TGGGTGTTGA GCCGGAGCGG TTTGGCAACC CGCAAAAGCG ATCACGTTCC
TGGATGGGAA CGCCGCTGAT CCTCGGCTAC GAAACGGTTG GCGTCATCTC CGTTCAGAGT
TACCGTCCAG GCATCTACGA TCAGGATAGT CTTGATCTGT TGCAGCGCAT CGGCAATCTG
CTGGCGGTCG CGCTGGAAAA TGCAGCGCTT GTCGAGCAGC AGCGTGCGTT GAGCGATGCG
TTAACCGGAC GCATTGCCGC CCGGACGCGC GAACTGGAGA CACTGACGGC GCTTGCAGAA
GAACTGGCGC TCCAGCGACC ACTCGATGAG TTGCTCAATC GTGCGCTGGC GCTGCTCACG
GAACACCTCA GCATGCGAGG CGGGGCAGTG CGATTGCTGA GCGCGGACTG CACCGAGCTG
ATCCTGGCTG CTGCTCAGGG CTTCCCGGAG GAGTACTCAG AACGCCTGGC GCGCCTGCCG
GTTGCTGGCA GCCTGATGCA CAGCGTCATC GAAGAGCGTC GTCCGCTCAT TATCGATGAT
CTGGCGCATA GCAGCCACTG GGAGCGCATC GGTCTGAACT ATCGCGCATT GATCGCCGTG
CCGTTGCAGA TCGGCGATCG GGTGTTGGGA ACCCTGCTGC TGGTTGATGA TCGCCAGCGC
GTGATCCAGG ATCAGGAAAT CGAGTTTGTG CGCGCTGTCG GTCACCAGAT TGCGATTGCG
ATTGAAAATG CCCGGTTGTT TGCTGAACGG GAACGTCAGG TCGCGGAACT CTCGGCGCTG
AGCGACATCA GCCATGCTGC CAGCACAACG CTGGAACTGC GCACCCTGTT ACGCCACATT
GCGCGCGCGC TGGCGCGCTT CATGCGCGCC GATGTTTTCT CGGTGGTCGT GTACGACGCC
GAACACGATG TCATCAGCGA TGGTCTGTCC ATCGATGAAG GTGAAGAGCA CACGTTCTGG
CAGCGCCAAC CCCCGCCGCC CGATTCGTTG ACCGCGTGGG TTTTACGGCA CCGACGCGCG
CTGCGCTTCG ATAACCTGAT CGAGGAGATT GAGCGTTTCC CGGAATTGAG CGTGCATATC
ATCGGCGCGG AGCGCACGGC ATTATCGTGG CTCGGCATGC CACTCATCGG GCGTGAGGGG
CAACCGATTG GCGTGCTGAT GGTGCAGGCG TACTCACCTG CCGCTTTCGA CGCGCGCGAC
GAGCAGTTTC TGGCGGCAGT GGCGCGCCAG GTGGCGCTGC ATGTGCAGAA TGTGATGCTG
TTTGCAGCGG AACAGGAAGC GCGACGCACT GCCGATACCC TGCGGGAAGT GGCGCGCGTG
CTGAGCGCCG CGTTCAGTTC AGGCGAGGTG TTAAAGGTCA TTCTGCGTGA ATTGAAGAAG
GTCATTCCGT ATGACAGCGC TTCGATCATG CTGCGCGAGG GTCGGATTCT GCGCGCTGCC
GCCGTTGCGC CGGAAACGAT AGCGACGCGG CTGGATACGA TGAACCGCCC GTTAGACGAA
CCCGGCGCGG CGGTCTGGGT GGTGAAACAC AAACAACCGC TGCTGATCGA TGATGTCCGC
ACGTCGTCGA TCTGGGCGCC TGAACCGCAT ATCAGTGAAA TTCGCTCGTG GATCGGCGTC
CCGCTCGTTG TCAGAGGCGA TGTGCTTGGC GTACTGAATA TCGACGCAAA CGAACGAGCG
CGCTTCACGA AGCGCGATGT CGCAGTTGCG CAGGTTTTTG CCGACAATGC TGCGATTGCC
ATTGAGAATG CGCGTCTGTA CGCCGAGTCG ATTGCGCGCC GCGAGCAGGA ACTGGAGATT
GCGCGTCGTA TCCAGGCGAA CCTGTTTCCG CGCGAACTCC CGCGCCGGCA GGGGATCGCG
CTGGCGGCGC GCTGCCTTCC GGCGCGTGAA GTGGGCGGGG ATTTCTTCGA CTGCTTTGCC
CTTGGCGAAC GCAAGGCAGT CGCCGTCATG ATCGGCGATG CGTCGGGCAA GAGTGTGGCG
GGCGCATTGT TGATGGCGAT GGCGCGCTCG GTCGGGCGCG CCGAAGCGAT CGATCACGAA
GAGCCGGCGC TGGTCTTGCG CGAAACCAAC CGCAGTATGG CGCACGATGT GCCGCGTGGC
ACGTTTGTTG CTCTCTGTTA CGCCACCATC GATCCTGCCG GACGCATGGC GGTGGCGAAT
GCCGGGCAAT TGACACCGGT GCTGGTACGC GCTGATGGCG GCATCGAGTA TCTCTATCCG
CCAGGACCGA CATTGCCCCT CGGCATTCAG CCCGATATGG GATATGAGAC GCTGGCGGTC
GATCTTGCAC CGGGCGACAC AGTGCTGTTC TTTACCGACG GTCTGGTCGA GGCGCACAAC
GCATCCGGCG AGTTGTTCGG CTTTGAGCGG CTCGATGCGA TCCTGTCAAC GTGCACCGCG
CTTTCGCCGC ATGCGTTGAT CGATCGCATT ATCGCCGAGG TGCAAGCCTT CATGGGGAAT
GTTCCGCAGC ACGACGATAT GACGCTGGTC GTGGTGCAGA TCGGCAGCGA TTGA
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| Protein sequence | MTLPVKDQIA ELQQELAALR IDRERNLRAL DIIRNVSIAC LGRVSARAIF EAIHRELLPV
FHYDAAYFAV CDPSNRETFR AALLVDEESV EYLENTPYGP LTGLMVRERK PLLVRDLERE
RDSLGVEPER FGNPQKRSRS WMGTPLILGY ETVGVISVQS YRPGIYDQDS LDLLQRIGNL
LAVALENAAL VEQQRALSDA LTGRIAARTR ELETLTALAE ELALQRPLDE LLNRALALLT
EHLSMRGGAV RLLSADCTEL ILAAAQGFPE EYSERLARLP VAGSLMHSVI EERRPLIIDD
LAHSSHWERI GLNYRALIAV PLQIGDRVLG TLLLVDDRQR VIQDQEIEFV RAVGHQIAIA
IENARLFAER ERQVAELSAL SDISHAASTT LELRTLLRHI ARALARFMRA DVFSVVVYDA
EHDVISDGLS IDEGEEHTFW QRQPPPPDSL TAWVLRHRRA LRFDNLIEEI ERFPELSVHI
IGAERTALSW LGMPLIGREG QPIGVLMVQA YSPAAFDARD EQFLAAVARQ VALHVQNVML
FAAEQEARRT ADTLREVARV LSAAFSSGEV LKVILRELKK VIPYDSASIM LREGRILRAA
AVAPETIATR LDTMNRPLDE PGAAVWVVKH KQPLLIDDVR TSSIWAPEPH ISEIRSWIGV
PLVVRGDVLG VLNIDANERA RFTKRDVAVA QVFADNAAIA IENARLYAES IARREQELEI
ARRIQANLFP RELPRRQGIA LAARCLPARE VGGDFFDCFA LGERKAVAVM IGDASGKSVA
GALLMAMARS VGRAEAIDHE EPALVLRETN RSMAHDVPRG TFVALCYATI DPAGRMAVAN
AGQLTPVLVR ADGGIEYLYP PGPTLPLGIQ PDMGYETLAV DLAPGDTVLF FTDGLVEAHN
ASGELFGFER LDAILSTCTA LSPHALIDRI IAEVQAFMGN VPQHDDMTLV VVQIGSD
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