Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2496 |
Symbol | |
ID | 5209465 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 3083942 |
End bp | 3085801 |
Gene Length | 1860 bp |
Protein Length | 619 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640596101 |
Product | phosphoenolpyruvate carboxykinase |
Protein accession | YP_001276823 |
Protein GI | 148656618 |
COG category | [C] Energy production and conversion |
COG ID | [COG1274] Phosphoenolpyruvate carboxykinase (GTP) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.754041 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGACAT CAGTCGTAGA GGCGCCAGCG TATGTGAAGA ATGAAAAACT GATCCGCTGG GTCCAGGAGA TGGTCGATCT GTGCAAACCG GATCGCGTTC ACTGGTGTGA CGGCTCAAAG GCGGAGTATG ACGCGCTGTG TGAACAACTC GTCCAGGCAG GGACGTTCAT TCGCTTGAAT CAGGAGAAGT GGCCCGGCTG CTTCCTGGCG CGTTCTGATC CGAGCGACGT CGCGCGTGTC GAAGATCGCA CCTTCATCTG TAGCGTCAGT CGTGGCGATG CCGGACCAAC CAACAACTGG ATGTCGCCCA GGGAGATGAA GGAGACGCTC ATCCCGCTGT TCGACGGTTC GATGCGCGGA CGCACGATGT ATGTCATTCC CTTCTGCATG GGACCGATCG GGTCGCCGCT TGCCCAGATC GGCGTCCAGC TCACCGACTC GGCGTATGTT GTCGTGAATA TGTGGATCAT GACACGGATC GGGCAAAAGG TGATTGAGGC GCTGGGCGAC AACGACTTTG TTCCGTGTCT GCACTCAGTT GGCGCGCCGC TTGAACCCGG ACAGAAGGAT GTTCCCTGGC CCTGCAATCC GACAGTCAAG TATATCGTCC ACTTCCCGGA AGAGCGCATG ATCTGGTCGT ATGGCAGCGG CTATGGCGGC AACGCTCTCT TGGGCAAGAA ATGCCTGGCA CTGCGCATCG CATCGGTCAT TGCCCGTGAT GAAGGATGGC TTGCGGAGCA CATGCTTATC CTGGGGGTCA AGGATCCAAA AGGGCGCAAG ACCTACGTTG CAGCGGCCTT CCCCAGCGCC TGCGGCAAGA CCAACTTTGC CATGCTCATC CCGCCCAAAC CCTTCACAGA AGAGGGATGG GAAGTAACGA CGGTTGGTGA CGACATCGCC TGGATCAAAC CCGGTCCTGA TGGGCGATTG TACGCGATCA ACCCGGAGAG CGGCTACTTC GGCGTCGCAC CCGGCACGTC GTATGAAACG AACCCGAACG CAATGGCGGC GCTGTCGCGC AACACCATTT TCACCAATGT TGCGCTGACG CCCGATGGCG GCGTCTGGTG GGAAGGAATG ACCAAAGAGC CGCCGCCGGA AGCGATCGAC TGGCAGGGGA AGCACTGGAC GCCCGATTCA GGCAGAAAAG CCGCGCACCC GAATGCACGC TTCACTGCTC CGGCGTCGCA GAACCCGGCG ATCGATCCCG ACTGGGAAAA TCCAAATGGC GTTCCCATTC GCGCATTCAT TTTTGGCGGT CGCCGCAGCA CCGTCGTGCC ACTGGTTTAC CAGTCGTTCA ACTGGACGTT TGGCGTCTAC CTGGCTGCCA CTATGGGATC GGAGATGACG GCTGCCGCCT TTGGCAAGAT TGGTGAAGTG CGCCGCGATC CGATGGCGAT GCTCCCATTC TGCGGCTATC ACATGGGCGA CTACTTCAAT CACTGGTTGC AGTTCGGTCG TACCATTCCC AACCCGCCAC GCATCTTCAG CGTCAACTGG TTCCGCAAAG ATGCCGAGGG GAATTTCCTC TGGCCCGGCT TCGGCGAGAA TATGCGTGTT CTCAAGTGGA TCGTCGAGCG TGCCAATGGT CGCGCGGTCG GCATCGAAAG CCCGATTGGC TGGATGCCGC GCTACGACGA TATCGACTGG CGCGGACTGG AAGATTTCAG CGAAGAGAAG TTCACCGAAC TGATGGCGGT CGATCGCGAG CAGTGGACCC ATGAAATCCT GCTGCACGAA GAGTTGTTCC TGAAACTCTA TGATCGCCTG CCCAAGGAAT TCCGCTCCGT TCGCGACCTG CTCCTCTCGG CGCTCTGGCG CTCACCCGAG CATTGGGATC TGCTCGACGG CGGGCACTGA
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Protein sequence | METSVVEAPA YVKNEKLIRW VQEMVDLCKP DRVHWCDGSK AEYDALCEQL VQAGTFIRLN QEKWPGCFLA RSDPSDVARV EDRTFICSVS RGDAGPTNNW MSPREMKETL IPLFDGSMRG RTMYVIPFCM GPIGSPLAQI GVQLTDSAYV VVNMWIMTRI GQKVIEALGD NDFVPCLHSV GAPLEPGQKD VPWPCNPTVK YIVHFPEERM IWSYGSGYGG NALLGKKCLA LRIASVIARD EGWLAEHMLI LGVKDPKGRK TYVAAAFPSA CGKTNFAMLI PPKPFTEEGW EVTTVGDDIA WIKPGPDGRL YAINPESGYF GVAPGTSYET NPNAMAALSR NTIFTNVALT PDGGVWWEGM TKEPPPEAID WQGKHWTPDS GRKAAHPNAR FTAPASQNPA IDPDWENPNG VPIRAFIFGG RRSTVVPLVY QSFNWTFGVY LAATMGSEMT AAAFGKIGEV RRDPMAMLPF CGYHMGDYFN HWLQFGRTIP NPPRIFSVNW FRKDAEGNFL WPGFGENMRV LKWIVERANG RAVGIESPIG WMPRYDDIDW RGLEDFSEEK FTELMAVDRE QWTHEILLHE ELFLKLYDRL PKEFRSVRDL LLSALWRSPE HWDLLDGGH
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