Gene RoseRS_2496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2496 
Symbol 
ID5209465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp3083942 
End bp3085801 
Gene Length1860 bp 
Protein Length619 aa 
Translation table11 
GC content59% 
IMG OID640596101 
Productphosphoenolpyruvate carboxykinase 
Protein accessionYP_001276823 
Protein GI148656618 
COG category[C] Energy production and conversion 
COG ID[COG1274] Phosphoenolpyruvate carboxykinase (GTP) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.754041 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGACAT CAGTCGTAGA GGCGCCAGCG TATGTGAAGA ATGAAAAACT GATCCGCTGG 
GTCCAGGAGA TGGTCGATCT GTGCAAACCG GATCGCGTTC ACTGGTGTGA CGGCTCAAAG
GCGGAGTATG ACGCGCTGTG TGAACAACTC GTCCAGGCAG GGACGTTCAT TCGCTTGAAT
CAGGAGAAGT GGCCCGGCTG CTTCCTGGCG CGTTCTGATC CGAGCGACGT CGCGCGTGTC
GAAGATCGCA CCTTCATCTG TAGCGTCAGT CGTGGCGATG CCGGACCAAC CAACAACTGG
ATGTCGCCCA GGGAGATGAA GGAGACGCTC ATCCCGCTGT TCGACGGTTC GATGCGCGGA
CGCACGATGT ATGTCATTCC CTTCTGCATG GGACCGATCG GGTCGCCGCT TGCCCAGATC
GGCGTCCAGC TCACCGACTC GGCGTATGTT GTCGTGAATA TGTGGATCAT GACACGGATC
GGGCAAAAGG TGATTGAGGC GCTGGGCGAC AACGACTTTG TTCCGTGTCT GCACTCAGTT
GGCGCGCCGC TTGAACCCGG ACAGAAGGAT GTTCCCTGGC CCTGCAATCC GACAGTCAAG
TATATCGTCC ACTTCCCGGA AGAGCGCATG ATCTGGTCGT ATGGCAGCGG CTATGGCGGC
AACGCTCTCT TGGGCAAGAA ATGCCTGGCA CTGCGCATCG CATCGGTCAT TGCCCGTGAT
GAAGGATGGC TTGCGGAGCA CATGCTTATC CTGGGGGTCA AGGATCCAAA AGGGCGCAAG
ACCTACGTTG CAGCGGCCTT CCCCAGCGCC TGCGGCAAGA CCAACTTTGC CATGCTCATC
CCGCCCAAAC CCTTCACAGA AGAGGGATGG GAAGTAACGA CGGTTGGTGA CGACATCGCC
TGGATCAAAC CCGGTCCTGA TGGGCGATTG TACGCGATCA ACCCGGAGAG CGGCTACTTC
GGCGTCGCAC CCGGCACGTC GTATGAAACG AACCCGAACG CAATGGCGGC GCTGTCGCGC
AACACCATTT TCACCAATGT TGCGCTGACG CCCGATGGCG GCGTCTGGTG GGAAGGAATG
ACCAAAGAGC CGCCGCCGGA AGCGATCGAC TGGCAGGGGA AGCACTGGAC GCCCGATTCA
GGCAGAAAAG CCGCGCACCC GAATGCACGC TTCACTGCTC CGGCGTCGCA GAACCCGGCG
ATCGATCCCG ACTGGGAAAA TCCAAATGGC GTTCCCATTC GCGCATTCAT TTTTGGCGGT
CGCCGCAGCA CCGTCGTGCC ACTGGTTTAC CAGTCGTTCA ACTGGACGTT TGGCGTCTAC
CTGGCTGCCA CTATGGGATC GGAGATGACG GCTGCCGCCT TTGGCAAGAT TGGTGAAGTG
CGCCGCGATC CGATGGCGAT GCTCCCATTC TGCGGCTATC ACATGGGCGA CTACTTCAAT
CACTGGTTGC AGTTCGGTCG TACCATTCCC AACCCGCCAC GCATCTTCAG CGTCAACTGG
TTCCGCAAAG ATGCCGAGGG GAATTTCCTC TGGCCCGGCT TCGGCGAGAA TATGCGTGTT
CTCAAGTGGA TCGTCGAGCG TGCCAATGGT CGCGCGGTCG GCATCGAAAG CCCGATTGGC
TGGATGCCGC GCTACGACGA TATCGACTGG CGCGGACTGG AAGATTTCAG CGAAGAGAAG
TTCACCGAAC TGATGGCGGT CGATCGCGAG CAGTGGACCC ATGAAATCCT GCTGCACGAA
GAGTTGTTCC TGAAACTCTA TGATCGCCTG CCCAAGGAAT TCCGCTCCGT TCGCGACCTG
CTCCTCTCGG CGCTCTGGCG CTCACCCGAG CATTGGGATC TGCTCGACGG CGGGCACTGA
 
Protein sequence
METSVVEAPA YVKNEKLIRW VQEMVDLCKP DRVHWCDGSK AEYDALCEQL VQAGTFIRLN 
QEKWPGCFLA RSDPSDVARV EDRTFICSVS RGDAGPTNNW MSPREMKETL IPLFDGSMRG
RTMYVIPFCM GPIGSPLAQI GVQLTDSAYV VVNMWIMTRI GQKVIEALGD NDFVPCLHSV
GAPLEPGQKD VPWPCNPTVK YIVHFPEERM IWSYGSGYGG NALLGKKCLA LRIASVIARD
EGWLAEHMLI LGVKDPKGRK TYVAAAFPSA CGKTNFAMLI PPKPFTEEGW EVTTVGDDIA
WIKPGPDGRL YAINPESGYF GVAPGTSYET NPNAMAALSR NTIFTNVALT PDGGVWWEGM
TKEPPPEAID WQGKHWTPDS GRKAAHPNAR FTAPASQNPA IDPDWENPNG VPIRAFIFGG
RRSTVVPLVY QSFNWTFGVY LAATMGSEMT AAAFGKIGEV RRDPMAMLPF CGYHMGDYFN
HWLQFGRTIP NPPRIFSVNW FRKDAEGNFL WPGFGENMRV LKWIVERANG RAVGIESPIG
WMPRYDDIDW RGLEDFSEEK FTELMAVDRE QWTHEILLHE ELFLKLYDRL PKEFRSVRDL
LLSALWRSPE HWDLLDGGH