Gene RoseRS_2487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2487 
Symbol 
ID5209456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp3075664 
End bp3076275 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content63% 
IMG OID640596092 
Producthypothetical protein 
Protein accessionYP_001276814 
Protein GI148656609 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.239635 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0244852 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTTG TTTCGTTCGT TCCTGAAACC ATGGCGCCGC GTGACGCCTA TCGCCTGCTG 
GTCAGCAGCG TCGTGCCGCG CCCCATCGGT TGGGCGTCAA CGATTGGCGC CGACGGTTCG
GTCAATCTGG CGCCCTTTTC GTTCTTCAAT GCCGTTGGCG GTCCCATGCC GTTCGTGATG
ATCTCGGTCA GTCGCCGTGC CGGTGCGATC AAGGACACGC TGCGCAACGC CAGCGAGACC
GGCGAAATGG TGCTGAACAT TGTTGATGAG GACCTGGCGC CGCAGATGAA TATCACGTCA
GGCGACTGGT CCTACGGCGA TAATGAGTTC GAGCGCGCCG GTCTCGCGGC GGCGCCGTCG
GTCGATGTGC GCCCGCCGCG CGTTGCAGCG GCGCCGGTGG CGATGGAAGT CAAAGTCACG
CAGATTGTGC CGGTCGAGGG CAGCAGTTAC ACCATGATCA TCGGGCGGGT GGTGCGTTTC
CATATCCGCC GTGACCTGTT GCGCCCGGAT GGGACGATCG ATCCGCTGCG GTTGCGACCG
GTGGCGCGGC TGAGCGGCGA TGAGTATGCC CGCCTTGGCG AAGTGTTTAC CCTGGAACGA
CCAGGGGCCT GA
 
Protein sequence
MDFVSFVPET MAPRDAYRLL VSSVVPRPIG WASTIGADGS VNLAPFSFFN AVGGPMPFVM 
ISVSRRAGAI KDTLRNASET GEMVLNIVDE DLAPQMNITS GDWSYGDNEF ERAGLAAAPS
VDVRPPRVAA APVAMEVKVT QIVPVEGSSY TMIIGRVVRF HIRRDLLRPD GTIDPLRLRP
VARLSGDEYA RLGEVFTLER PGA