Gene RoseRS_2480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2480 
Symbol 
ID5209449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp3067323 
End bp3068558 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content61% 
IMG OID640596085 
Productbeta-lactamase 
Protein accessionYP_001276807 
Protein GI148656602 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.26212 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACA CAGCCGCATC TCCCGAAAGC GTCGGCATCA GTTCTGACCG TCTGGCGCGC 
ATTCGTCCGG CGATGCAACG CTGGATCGAC CGGGGAACTA TTGCTGGCGC AAGTATGATG
ATCGCACGGC GTGGCACGAT CGTCTACGCC GAGCAGGTTG GGCGGATGAG CAAGGAAACC
GACGAGGCGT TGCGGAGTGA TGCCATTTTT CGCATCTACT CGATGACCAA GCCGATCGTC
TGCACCGCCC TGATGACGCT CTACGAGGAA GGGCGTTTCC AGTTGATCAC ACCGCTGGCG
ACGTTCATCC CGGCGTTCGC AAACGTCAAA GTATTGCAAC AGGATAAAGA AGTCGCGCCG
CAACGTCCGA TCACCATTGG CGACCTGATG ACCCACCTGG GCGGGTTCAC CTATGACTTC
CTGATCGACT CGCCGGTCGG CGAGTTGTAC CGTCAGCACG AACTGATGCA CAATGCACAG
CGCACGCTGC AACAGTTCGT CGACGAGCTC GCCCGACTGC CGCTGGCGTA CCATCCCGGC
ACGAAGTGGC ACTACAGCGT CTCGATCGAT GTCGCAGCGC ACGTGATCGA GATCATCGCC
GACCAACCCC TGCGTCATTT TCTCCGCGAA CGGATCTTCG ATCCGCTCGG CATGGTCGAT
ACCGACTTCT ACGTGCCGCC GGAGAAGCGT CACCGCCTGG CTGCCATGTA CGGCGTCGGC
GATCTGGGGG CGCGGGGTAT GACGATCCTG CAGATGTTCT TCAACTGGCA ACAGGGGATC
CTGGAGCGGA TCGATCCGCA GGAGAGCTAT CCGGTCGATC AGCCGGAGAC CTTTGCGCGC
GGCGGTCATG GACTGTTCTC GACAGTGCAG GACTACATGC GGTTCGCATT GATGCTACTC
AACGGCGGAA CGCTCGACGG GACGCGCATC CTGGGACGCA AGACGCTGGA ACTGATGCAC
GCCAACCACA TCCCGCCGGC GCTTCTGCCA TGGGATATTG CCGGCATCGC ATACCCCGGC
TACGGGTTTG GTCTTGGATC GCGCGTCTTG ATGGACGTCG GGCTGTCGGG CATGCCGGGA
ACAGCAGGCG AATTCGGATG GGCTGGCGCT GCCACGACCT ACTACTGGGT CGATCCTGCC
GAGTCATTCG CTGGCGTCTT CATGACGCAA TACCAGGGAC TGGATGAACC GCAGCGCGAC
TTTCGTGCGC TGGCATACCA GGCAATTGTG GACTAG
 
Protein sequence
MSDTAASPES VGISSDRLAR IRPAMQRWID RGTIAGASMM IARRGTIVYA EQVGRMSKET 
DEALRSDAIF RIYSMTKPIV CTALMTLYEE GRFQLITPLA TFIPAFANVK VLQQDKEVAP
QRPITIGDLM THLGGFTYDF LIDSPVGELY RQHELMHNAQ RTLQQFVDEL ARLPLAYHPG
TKWHYSVSID VAAHVIEIIA DQPLRHFLRE RIFDPLGMVD TDFYVPPEKR HRLAAMYGVG
DLGARGMTIL QMFFNWQQGI LERIDPQESY PVDQPETFAR GGHGLFSTVQ DYMRFALMLL
NGGTLDGTRI LGRKTLELMH ANHIPPALLP WDIAGIAYPG YGFGLGSRVL MDVGLSGMPG
TAGEFGWAGA ATTYYWVDPA ESFAGVFMTQ YQGLDEPQRD FRALAYQAIV D