Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2479 |
Symbol | |
ID | 5209448 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 3066179 |
End bp | 3067309 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640596084 |
Product | ABC-2 type transporter |
Protein accession | YP_001276806 |
Protein GI | 148656601 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | [TIGR00025] ABC transporter efflux protein, DrrB family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.664004 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.270232 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCGCA TCCTGCCGAT CATTCGCAAG GAATTCATCC ACATTCTGCG TGACCGGCGC GCGCTGATGA TCGCCTTCCT GACGCCGGTG ATCCAGATGG TCATCCTCGG CTACGCTGCA ACGACCGATG TGCGCAATGT GCCGCTGGCA GTCCTTGATC AGGATCGCAC CCGCCAGAGC CGCGCGCTGA TCGACGCCTT CGTGCAGTCC GGGCAATTCA CAGTCTATCG TTATGTCATG TCAGAACGTG ATCTGGCGGC GCAGATTGAT AGCGGTCAGG CGCGCGCCGG GCTGATCATT CCACCGGATT ACGGGCGCAC CGTCACTGCC GGGCGTGACG TTGGGGTTGT TTTTGTGCTC GACGGATCTG ATCCATCGGT TGCATCGAAT GCGCTGTCAT CGGCACGGCT GATCGGCGTG GCGCTGGCAA CCAGGGTGCG CGAAGAGACG CTGGCGCGAC GCGGCGCGAC GACCACGCTC ATGCCCGGTG TGCCGCAGGT GCGTGAGCGT GTCTGGTACA ACCCAGACAT GGACAGCGCC GTCTTCATGG TGCCGGGGCT GATCGGACTG GTGCTGCAAT TTCAGGCGAC CCTCCTGACG GCGTCGGCAG TGGTGCGTGA ACGGGAACGC GGCACGATCG AACAGTTGAT CGTGACCCCG ATTCGCCCCT ACGAGTTGAT GCTGGGAAAA ATCCTGCCGT ATGCCGTGAT CGAACTGCTC GTCGTCGGCG AGGTGTTGCT GGTAGGAACG CTCTGGTTTG GCGTTCCAAT CCGCGGCAGT TTGATCCTGC TGGTGGCTAT CGCGTGCCTG TTCCTGGTTT CGACGCTGGC GCTCGGACTG CTGATCTCGA CCATTGCGCA CACCCAGTTT GAAGCGTTCC AGTTGTCCTT TCTGACCCTC TTGCCGTCGG TGTTCATTTC CGGCTTCATC TACCCGATCG ATGCCATGCC TGCTGCGCTC CAGCTGATCA GCAAGATCAT CCCGCTGACC TACTTTCTGG TCGTTGTGCG CGGCATCATC ATCAAGGGTG TGGGCATCGA AGCGTTGCTG CCGCAGATCG CAGCGTTGAC AATCTTCGGC GCGGCGCTCC TGACCATCGC ATCACTGCGC TTCAGAAAGC GATTGGATTG A
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Protein sequence | MNRILPIIRK EFIHILRDRR ALMIAFLTPV IQMVILGYAA TTDVRNVPLA VLDQDRTRQS RALIDAFVQS GQFTVYRYVM SERDLAAQID SGQARAGLII PPDYGRTVTA GRDVGVVFVL DGSDPSVASN ALSSARLIGV ALATRVREET LARRGATTTL MPGVPQVRER VWYNPDMDSA VFMVPGLIGL VLQFQATLLT ASAVVRERER GTIEQLIVTP IRPYELMLGK ILPYAVIELL VVGEVLLVGT LWFGVPIRGS LILLVAIACL FLVSTLALGL LISTIAHTQF EAFQLSFLTL LPSVFISGFI YPIDAMPAAL QLISKIIPLT YFLVVVRGII IKGVGIEALL PQIAALTIFG AALLTIASLR FRKRLD
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