| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2474 |
|---|
| Symbol | |
|---|
| ID | 5209443 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 3061122 |
|---|
| End bp | 3062021 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640596079 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001276801 |
|---|
| Protein GI | 148656596 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.471366 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.779331 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGCGC AAACGACTGT CGCGCTCGAA GTTCGTGACG CTCTGAAACG CTTCGGGCGC
GAAACGACGC AGGGACAGCC GTTCTGGAAA CGCAGCGCCC GCAAGCCGCC AGAGATGACG
GTGGCGGTAG ACCATATTTC GCTCAGTGTG CGTCGCGGTG AGATTTTCGG TCTCCTCGGC
GCAAATGGTT CCGGTAAATC GACCCTGATC CGGCTGATCT CGACGCTGCT CATTCCCGAT
AGCGGCGAGA TCCGCGTCTT TGGGTACGAT GTCCAGCGAG AGGAACGGAC GGTGCGGCGG
TTGATCAATC GGGTCAGCGT CGAAGCGTCG TTTTTCAAGA AGTTGTCGGC GCTGGAAAAT
CTGATGTACG CGGCGCGTCT CTACGACCTG CCCAGAGCGT ATGCGCGCCA GCGTTCGATC
ACGATCCTGC GCAGCCTCGG CTTGAGCGAG AAACGACTCT ACGAACCGCT CGAGCATATG
TCGCGCGGGA TGCAGCAGAA GGTCGCTATT GCGCGTGGGC TGCTGACATC GCCGGTGCTT
TTGTTGCTCG ACGAGCCGAC AACCGGACTG GATCCACGCT CGAAGCACGA TGTGCAGCGC
TTCATTCTGC GGATGCGCGC GGAGCATGAT ACGACGGTGT TCCTCACAAC ACACGACATG
GACGAGGCGG ACCGTCTGTG CGACCGGATT GCGATCATCG ACAATGGTCG GATCGTGGCG
CTCGATACGC CGCAAGGCTT AAAGAGTTCG CTTGGCGCTG GCGGCAAGAA CGGCAGCGCA
ACGATGGAGG ACGTGTTTAT GGCGCTGACC GGCGAGAGTC TCGACGACGA TTTTGAGTCT
TCGGACGATT TCGAGAGCAG CGATGGGAAC GAAGCGACAA TCACAGGCGA TTGCAGTTGA
|
|---|
| Protein sequence | MAAQTTVALE VRDALKRFGR ETTQGQPFWK RSARKPPEMT VAVDHISLSV RRGEIFGLLG
ANGSGKSTLI RLISTLLIPD SGEIRVFGYD VQREERTVRR LINRVSVEAS FFKKLSALEN
LMYAARLYDL PRAYARQRSI TILRSLGLSE KRLYEPLEHM SRGMQQKVAI ARGLLTSPVL
LLLDEPTTGL DPRSKHDVQR FILRMRAEHD TTVFLTTHDM DEADRLCDRI AIIDNGRIVA
LDTPQGLKSS LGAGGKNGSA TMEDVFMALT GESLDDDFES SDDFESSDGN EATITGDCS
|
|---|
| |