Gene RoseRS_2431 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2431 
Symbol 
ID5209400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp3004717 
End bp3005457 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content61% 
IMG OID640596036 
ProductABC transporter related 
Protein accessionYP_001276758 
Protein GI148656553 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000823093 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000192607 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCACGCTG AACCACTGAT AATTCTTGAT CGCGTCTCGA AGAGTTATGA AGAAGCCGGA 
CGCGAGCGCT TCGTGCTGCG TGATGTCAGC GCCTCGTTCG CGCGCGGCGA GTTCGTGGTG
CTGGTCGGCA AGAGTGGAAC GGGCAAAAGT ACGCTCCTGA ACCTGATCAG TGGCATCGAT
ACGCCGACCT CCGGTGAGAT CATTGTGAAT GGTCAATCGT TGACTCGCCT GCCGGAACGT
GAACGAACGC TGTTCCGGCG CCGCTCGATA GGCTTCATCT TTCAGTTCTA CAACCTGACG
CCGACATTGA CGGTGCTGGA GAATCTGCTC CTGCCGCTCG AGTTGAACGG TCGGGTAACG
GCGCGCGACC GCGCGGCTGC GCTCGATCTG CTGGCGCAGG TTGGGCTTGC CGATCGCCGG
AATGCTTACC CCGACCGTCT TTCTGGTGGA GAACAGCAAC GGGTGGCGGT TGCGCGCGCG
CTGGTGCACG ATCCGCTGCT GGTACTGGCG GATGAGCCGA CCGGGAACCT CGATAGCGAG
ACCAGTCAGC AGGTGCTCGA TCTGCTCGAT ACCCTCACCC GCCGCGCCGG GAAAAATCTC
GTGATGGTCA CCCACAGCCC TGAGGTGGTC GGTCTGGCGG ATCGCCTGTT CCGGATCGTC
GAAGGGCATC TGATTGAAGA ACAGGCGCCG GTAGCGCGTT CGCTTTCCTC ATCCTCCCTG
CATCCTTCCT CTCACGTGTA G
 
Protein sequence
MHAEPLIILD RVSKSYEEAG RERFVLRDVS ASFARGEFVV LVGKSGTGKS TLLNLISGID 
TPTSGEIIVN GQSLTRLPER ERTLFRRRSI GFIFQFYNLT PTLTVLENLL LPLELNGRVT
ARDRAAALDL LAQVGLADRR NAYPDRLSGG EQQRVAVARA LVHDPLLVLA DEPTGNLDSE
TSQQVLDLLD TLTRRAGKNL VMVTHSPEVV GLADRLFRIV EGHLIEEQAP VARSLSSSSL
HPSSHV