Gene RoseRS_2428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2428 
Symbol 
ID5209397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp2999732 
End bp3000478 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content62% 
IMG OID640596033 
Productpeptidase C26 
Protein accessionYP_001276755 
Protein GI148656550 
COG category[R] General function prediction only 
COG ID[COG2071] Predicted glutamine amidotransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0394761 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGAG TGTGCATCGG CATTACGTGT GGAACATTCT ACGACCGCGA CTGGTGTCCG 
CCCTCGATCG GGCACCGTAA GACCTATATT GACGCCGTCG TTGCCGCTGG CGGCGCGCCG
TTCCTTATCC CGTCCATCGA CGACGAATCG GCGTTGCGTG CATTGTACGA ACGGATCGAT
GGGTTGTTGC TGGCAGGCGG CGGCGACATC GAGCCGCACC ATTACGGCGA AGCGCCGCTT
CCCGCGCTTG GCGTCGTCGA TGCGCTGCGC GACCGCACCG AACTGCCTCT GGTGCGCTGG
GCAGTCGCTG AAGGGAAACC GGTGCTCGGC ATCTGCCGCG GCGCGCAGAT GGTCAACGTT
GCACTTGGCG GCGCCCTGTA CCAGGATATC CCTTCACAGA TCGACACATC GCTCAATCAC
TCCGATTCGT ATGCCCGCCA GGACTGGACA TATCTGGCGC ATACGTTGCG CCTGTCGCCC
GATTCGCGCC TGCGACGGAT CCTTGGCAGT GATGAACTGC CGATCAACTC GTTGCACCAT
CAGTCGATCA AAACGGTTGC ACCCGGGCTG GTTGCCGTCG GTTGGGCGCC GGACGGCGTT
ATCGAAGCCA TCGAGGGCAC GAATGGTCAC TTTCTGATTG GCGTCCAGTG CCATCCCGAA
GCGCTCCAGA GCGAGGTCGA TCCACGCTGG CGCGCGCTGT TCCGCCGCTT CATCGAGGCA
TGCGTGCAGT CAAAGATCAC GGCGTAG
 
Protein sequence
MSRVCIGITC GTFYDRDWCP PSIGHRKTYI DAVVAAGGAP FLIPSIDDES ALRALYERID 
GLLLAGGGDI EPHHYGEAPL PALGVVDALR DRTELPLVRW AVAEGKPVLG ICRGAQMVNV
ALGGALYQDI PSQIDTSLNH SDSYARQDWT YLAHTLRLSP DSRLRRILGS DELPINSLHH
QSIKTVAPGL VAVGWAPDGV IEAIEGTNGH FLIGVQCHPE ALQSEVDPRW RALFRRFIEA
CVQSKITA