Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2426 |
Symbol | |
ID | 5209395 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 2997212 |
End bp | 2998861 |
Gene Length | 1650 bp |
Protein Length | 549 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640596031 |
Product | amidohydrolase 3 |
Protein accession | YP_001276753 |
Protein GI | 148656548 |
COG category | [R] General function prediction only |
COG ID | [COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0987019 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCACGC TGCGTGCCCG CGATCTCGCG CCCGATCTGA TCCTGTTCAA CGGTGCGATA ACAACGTTCG ATCCCGAGTT GCCGCGTTGC TCCGCCATTG CCTGCAAGGA TGGGCAGGTT GTCGCAATCG GCGCCGACGC CGATGTTCGT GCGCTTGCCA GTCCACGAAC CGAACAGATC GATCTCGGCG GTCGCACAGT TGTTCCCGGG TTCAACGACG CGCATAACCA TATGCTCGAA CTGGGGATCA AGTTCACCCG CCTGCAACTT GAGCATTGCA CGTCAATTGC AGAGATGGTC GCAATGGTGC GCGATCAGGC GGCAAAAACC CCGCGCGGCG AATGGATCAT CGGCGAGGGA TGGAACGAGT CGCTCTTCGC GGAAGGGCGT TTGCCCAACC GTCTCGATCT CGATGCGGCA ACGACCGATC ATCCGGTGCT GTTGAAGCGT TTCTTCAATA TGGATGTTGT GAACAGCCGC GCGCTCGAAC TGGCGGACGT GCATGCGACG ACGCCCGATC CGCAGGGCGG CAGGATCGAG CGGTTTGCCG ATGGTTCTCC GAACGGCATT CTGCGGGCAT CCGCTAAACT CTTCTGCCGA CGCCTGATCG CCCGACCGAC CCCTGAGCAG GCAGTCGCAG CGCTTGAAGC TGCCGGTCGC GCGTATCTGG CGGTTGGTAT CACCAGTATC CTTGATCCGG GGCTGCAACC ATGGGAAATG CGCGCATATC TGGATGCTCG CCGCGCCGGA CGATTGCCGG TGCGGGTCAA CCTGATGCCC TCCTGGCACG GCTTCCGTGA AGACGAGACC CGCGATCAAC TCGATGCACG CGCTGCCGAA CTGGGAGTGT ACAGCGGTCT GGGGGATCGC TGGCTCAGTC TGGGCGGGCT GAAGATGGCG ATTGACGGTG GGACGACAAG CCGCACCGCC TGGATGTTCC AGCCATTCGT TGGCGAAGAG AAGGTCTATG ATTACAACCG GCTCGACCCG GAAGACCTGC GCGAATTCTT TGCCCGCGGT CACGCGCTGG GGTGGGACAT CGGCATTCAC GCAATTGGCG ACCGGGCGCA CCACGAAGCG GCGCGCGCCT TCGCTGAGGT CATCGAAGCC TCGCCGCGCA AGGATCACCG GCATAACCTG ATCCACGCCT ACTTCGCCAC TGAAGAAAGC CTGCGGCATA TGGCAACATA TCAGATCGCC GCTGTTGTTC AGCCCACCTT CATCTACTAC GAAGGGGATG ATCTCTTCCG CGATGTGGGC GAGCGTCTGG CGCATCAGTA CAAACCGGTG CGCACCTACC TCGACCGCGG CATTCCGGTT ATCGCAACCA GCGATATTCC CAGCACAGTG CATTACAATC CCATGATCAG TCTCTACAGC CTGGTGACGC GCAAAACGTG GAAGGGAACG CTCATCGCGC CGCAGGAGGC GATCACCCGC GAAGAAGCCC TCTATGCCTG CACAGCAGCC GGCGCCTGGT TGACCCGTGA AGAGCACGTC AAAGGGCGAT TGTCGCCCGG TTTTCTGGCA GACATGGTTG TGCTCGACCG TGATTATTTC ACCTGCCCGG CGGAGGAGAT CAGGGAGATT CAGGTGGATA TGACGGTGAT CGATGGATGT GTGGCGTACT GGCGAAATGG ATCACGCTGA
|
Protein sequence | MPTLRARDLA PDLILFNGAI TTFDPELPRC SAIACKDGQV VAIGADADVR ALASPRTEQI DLGGRTVVPG FNDAHNHMLE LGIKFTRLQL EHCTSIAEMV AMVRDQAAKT PRGEWIIGEG WNESLFAEGR LPNRLDLDAA TTDHPVLLKR FFNMDVVNSR ALELADVHAT TPDPQGGRIE RFADGSPNGI LRASAKLFCR RLIARPTPEQ AVAALEAAGR AYLAVGITSI LDPGLQPWEM RAYLDARRAG RLPVRVNLMP SWHGFREDET RDQLDARAAE LGVYSGLGDR WLSLGGLKMA IDGGTTSRTA WMFQPFVGEE KVYDYNRLDP EDLREFFARG HALGWDIGIH AIGDRAHHEA ARAFAEVIEA SPRKDHRHNL IHAYFATEES LRHMATYQIA AVVQPTFIYY EGDDLFRDVG ERLAHQYKPV RTYLDRGIPV IATSDIPSTV HYNPMISLYS LVTRKTWKGT LIAPQEAITR EEALYACTAA GAWLTREEHV KGRLSPGFLA DMVVLDRDYF TCPAEEIREI QVDMTVIDGC VAYWRNGSR
|
| |