| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2416 |
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| Symbol | |
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| ID | 5209385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 2988057 |
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| End bp | 2989040 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640596021 |
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| Product | transketolase, central region |
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| Protein accession | YP_001276743 |
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| Protein GI | 148656538 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.488652 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGTCA TGACATTCAT CGAAGCGATC CGATCGGCAA TGCACGATGC CATGGCAGCC
GATGACCGGA TCATTGTCCT TGGTGAGGAT GTCGCCGTCA GAGGCGGCGT TTTTCTGGCG
ACTGAAGGGT TGCTGGCGCG TTTTGGCGAA CGCCGTGTGA TCGATATGCC GATTGCTGAG
TGCGCTATTG TGGGGGTTGC AATCGGTGCA GCACTCCATG GTCTGCTGCC GATTGCCGAG
ATTCAGTTCG CCGACTATAT TTACCCGGCA ATCGATCAGA TTCTCAATGA GGCGGCGCGC
CTCCGGTACC GTTCAAACGG TGACTGGAGC TGCCCGATTG TCGTCCGTGC TCCGTTTGGC
GCCGGCATTC ACGGCGCGCT CTACCATTCG CAGAGCGTCG AGCGCCTGTT TACCAGCACG
CCCGGCATCA AGGTCGTTAT CCCGTCAACG CCTGCCGATG CCAAAGGCTT GCTGATCGCC
GCGATTCATG ACCCGGACCC GGTGATCTTC TTCGAGCACA AGCAACTCTA CCGCTCGGTG
CGCGGCGAGG CGCCGGAAGG AATCTACCAC GAACCGATCG GCAAGGCGGT GGTGCGCCGG
AGCGGCACCG ATATGAGTGT GTTCAGTTAC GGGTTGATGG TGCACTATGC CCTGACTGCG
GCGGAGCAAC TTGCTGCTGA AGGGATCGAT GCCGAAGTCA TCGATCTGCG CACCCTGGCG
CCGCTTGATC GCGCGGCGAT TCTGGCGTCG GTTGAGAAGA CGGGGCGGGC GTTGATTGTG
CATGAGGACG TGCTGACCGG CGGTATCGGC GGGGAGATTG CGGCAATCAT TGCTGAGCAT
GCGTTCGAAT ACCTGGACGC GCCGGTGCGG CGCCTTGCAT CTCCCGATCT GTTCGCCACG
CCATTCGCCG ATCCGCTCGA GGATCATTTT ATGCTGAACC CGCAGAAAAT TGCGGCGGCA
ATGCGTGACC TGGCGCGCTA CTGA
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| Protein sequence | MPVMTFIEAI RSAMHDAMAA DDRIIVLGED VAVRGGVFLA TEGLLARFGE RRVIDMPIAE
CAIVGVAIGA ALHGLLPIAE IQFADYIYPA IDQILNEAAR LRYRSNGDWS CPIVVRAPFG
AGIHGALYHS QSVERLFTST PGIKVVIPST PADAKGLLIA AIHDPDPVIF FEHKQLYRSV
RGEAPEGIYH EPIGKAVVRR SGTDMSVFSY GLMVHYALTA AEQLAAEGID AEVIDLRTLA
PLDRAAILAS VEKTGRALIV HEDVLTGGIG GEIAAIIAEH AFEYLDAPVR RLASPDLFAT
PFADPLEDHF MLNPQKIAAA MRDLARY
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