Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2409 |
Symbol | |
ID | 5209378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 2980477 |
End bp | 2981331 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640596014 |
Product | hypothetical protein |
Protein accession | YP_001276736 |
Protein GI | 148656531 |
COG category | [R] General function prediction only |
COG ID | [COG1355] Predicted dioxygenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.156274 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATATTC GTCCATCCCC AATCGCCGGG AGTTGGTACC CTTCAAATCC TGCGCACCTG CAACACGAGA TTGATCGTTA CCTGGCTCAG GCGGAACCGC CAGTGCTACC GGGAAAGGTA TGGGGAGTGC TGGCGCCGCA TGCCGGCGTG CGCTACTCAG GTCCGATCGC TGCGTGGGCT TTCGCCTGTG TACGCGGCAG AACACCGGAG ATTATCGTCA TCGCATCACC CTGGCACCGC GGTGGACCAA CGCCACTGAT CACTACCGGA CACACCGCCT ACGAAACGCC GCTTGGCATC GTTCCTGTCG ATAACAATGC CATTGCGCAA CTCGACGAGG CGCTGCGACG ACGGGCGGGG TTTGGTCTGA CGCCGCGCCG CCACGATGAT GAACACGCGG TCGAGATCGA ACTGCCGTTT CTCCAGCGCG TGTTCGGTTC GTTTTGGTTG CTGCCGGTAA TGCTGGCGGA TCAGAGCGCC GTTACCTCGG CTGCGCTCGG CGCTGCGCTG GCGGAAACGC TGCGTGGGCG GGATGCGCTT CTCGTCGCCA GTTCCGATCT GTCGCACTAT GAACCGGAAC CGGTGGCGCG TCGCCTCGAT GCCGGGTTGC TGCGGCGAGT TGAAGCCTTC GATCCGGATG CCGTCATTGC TGCTGAGGCG GAAGGGGTCG GATATGCGTG CGGCAGTGGC GCGATAGCGG CTGTCCTGTG GGCATGCCGC GAACTGGGCG CGAACCGGGT GACTATCCTG CGCTACGGCA CATCCGGCGA TGTTGAACGC GCAGCGCCGT GGGTCGTCGG ATATGGGGCG GCGGCTATCT GGCAGGCGGC ATACAGCGAA GTGCAGAACA GGTGA
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Protein sequence | MDIRPSPIAG SWYPSNPAHL QHEIDRYLAQ AEPPVLPGKV WGVLAPHAGV RYSGPIAAWA FACVRGRTPE IIVIASPWHR GGPTPLITTG HTAYETPLGI VPVDNNAIAQ LDEALRRRAG FGLTPRRHDD EHAVEIELPF LQRVFGSFWL LPVMLADQSA VTSAALGAAL AETLRGRDAL LVASSDLSHY EPEPVARRLD AGLLRRVEAF DPDAVIAAEA EGVGYACGSG AIAAVLWACR ELGANRVTIL RYGTSGDVER AAPWVVGYGA AAIWQAAYSE VQNR
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