Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2362 |
Symbol | |
ID | 5209331 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 2923494 |
End bp | 2924567 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640595968 |
Product | beta-lactamase |
Protein accession | YP_001276690 |
Protein GI | 148656485 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCATTC CAGTCATCGA TGCCATTATG ACCGGCGCTA TTGACGGGCG CATCTTTCCC GGCGCGGTCG TCCTGGTTGC GCGTGATGCG GAGGTTCTCC ACGTTGCTGC GTATGGAACG ATGACCTACG ATCCATCCGG CAACAATCCC GTCACGCCAG CAACCATCTA CGATATTGCG TCATTGACCA AAATGTTCAC TGCAACTGCG GCGCTGCATC TGTACGACAA AGGGAAGATC GATCTGGCAG CGCCGGTTCA GGCGTATCTG CCGCACGTTC GTGCGCGTGA CGTTACCGTC TGGCATCTGC TGACCCACAC ATCGGGACTC GACCTGCGCC TTTCGACGCT CCGTCACGCG GGGCGCGCGG GGTTGCTGGC GGCGGTCTAC GACGCGCTGC CCGCCCGTCC GCCCGGCAGC AGCGTCGCCT ACACCAACAT CAATTCGTTG TTGCTGGGTG AAATCATCAC TGCCGTGTAT GGTCAACCGC TCGACAGAGC CATTGACGAA CTGGTCTGCC GACCACTGAG ACTGCAACGC ACTGGCTTCC GCCCCGATCC TGCGCTGATC GCGCATATTG CACCAACCGA GTTTGATGGG GAATGGCGTG GCTGCCTGGT TCACGGCGTC GTTCACGACG AAAGCGCGTA TGTGCTCGGA GGCATCGCCG GGCATGCCGG TCTCTTCAGC ACTGCCGGTG ATCTCTGGAC ATTTTGCCGC GCCTGGTTGC CTGCCGGGAG CGATCATCAG CCGACGCCGC TCCTGAACCC GACGACCCTG ACCCTGGCGA TAACCAATCA GACGCCAGGA CTGGCGCAGG CGTGTGGTCT CGGATGGATG ATTGATCGAC CAAACTTCAT GGGACCGGCG CCCCGCGGCA GTTACGGTCA CACCGGTTTC ACCGGACCGG CGCTGGTTAT TGTCCCCCGT GATCGTCTGA TCATCATCGT GCTGAGCAAC CGGGTCCACC CGCAGCGCAG CGCGCCACGT CACCACGCCA TTACTGCCGC AATCGTCGCC GCAGCGCTCG ACAGCATATC GGCGCCATAT GCGCTATCCG ATCCTTCGAT GTAA
|
Protein sequence | MPIPVIDAIM TGAIDGRIFP GAVVLVARDA EVLHVAAYGT MTYDPSGNNP VTPATIYDIA SLTKMFTATA ALHLYDKGKI DLAAPVQAYL PHVRARDVTV WHLLTHTSGL DLRLSTLRHA GRAGLLAAVY DALPARPPGS SVAYTNINSL LLGEIITAVY GQPLDRAIDE LVCRPLRLQR TGFRPDPALI AHIAPTEFDG EWRGCLVHGV VHDESAYVLG GIAGHAGLFS TAGDLWTFCR AWLPAGSDHQ PTPLLNPTTL TLAITNQTPG LAQACGLGWM IDRPNFMGPA PRGSYGHTGF TGPALVIVPR DRLIIIVLSN RVHPQRSAPR HHAITAAIVA AALDSISAPY ALSDPSM
|
| |