| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2354 |
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| Symbol | |
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| ID | 5209323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 2911204 |
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| End bp | 2914416 |
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| Gene Length | 3213 bp |
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| Protein Length | 1070 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640595960 |
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| Product | transcriptional activator domain-containing protein |
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| Protein accession | YP_001276682 |
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| Protein GI | 148656477 |
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| COG category | [K] Transcription |
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| COG ID | [COG2909] ATP-dependent transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.607566 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCTGC GATTTCAGCA GAAGCTCGTT GTTCCAACGT CGGCGCGACC GCTGATCGAA
CGACCGAACG TTCTCGCGCA GCTTGACCGT GCCATCCGGA GCAAGCGCGT CGTTGCGCTG
GCTGCGCCCG CCGGCTGGGG GAAAACGACT GCGCTGGCGC AGTGGGTTGC GCAGCGCACG
ATGCCGGTTG CCTGGTATAC CCTCGATAGC GCCGATCGCG ATCCGCACGT CTTCCTCGAC
TACCTGCTCC ACAGCGTTGC CGATTTTGTC CCAGGAGCGC CGGGTATCGC AGCGCGGCTC
GCCGAAACGA CCCCGCAAGG GCTGGCGGAG ATGATCCACC AGGTGGCGCT TGCATTTGCG
GATGCGCCTG AACATTTTGC GCTGATCCTC GATGATGTCC ATGTACTTGA CGATGACCAG
GCGCAATCCA TTCCGGGGGT ATCGCTCGTC TTTACGCTAC TCGCTTCGAT CGCGGAATAC
GCCTCCCACT GCCATCTGGT GCTCGCTTCG CGCACCCTGC CGGTGTTGCA TGGCATGGTA
CGCATGGTCG CACAGCAGCG CGCTGCGGTC TTCGATTATA GCGTGTTACA GTTCCATCGC
GACGACACGC AGCGTCTTGC TGGCATAACA AGCGGGTTGA TCCTCTCCGA CGAAGCAGCG
GAACAGTTGA CCGCATCAGT TGGCGGCTGG GTTACTGGCA TTGTCCTCTC GCTGGATCAA
CCGGTTGCGC ACAAAGACGG GATGACAGGT CAGCAGGTTG TTGATCGACA CCTGATGCAC
GTTCCCACAC CTGAAGAGGC GGTCATCGAA GCCAATACCA GTCAGGTATA CGCTTACTTT
GCCGAGCAGA TTCTGGCACC GTTGCCAGCG GATCTGCAAC GTTTCCTCGA AGACACCAGC
GTTCTGCACG ATCTATCGCC ACAGCGCTGC GATATACTGC GTTCTGCCGA TAACTCGGCA
GAATATCTCG ATGAGATCAG GCGGCGCGGG TTATTCGTCT CCAGCCGCGC CGGATGGCTC
TCGTATCACA GCCTGTTTCG CGATTATCTG CGCTCACGCC TGGCGCGCGA TCCGCAACGA
TGCCGGCAGT TGCTGCGTTC CGCCGGTGAC CTGTATGCTG CTGAAGATGA TATCGAGCGT
GCGCTTGACT GCTACCTGGC AGCCGGCGAC GATCAGCACG CTATCGATCT GATCCGTTCC
GCCGTGCCGC GCCTGCGGCA GTGTTCGCGC CAGACAACCC TGCTGACCTG CTTCGAACGT
CTGCACCGCG CGCGCAGGAC AAATGATCAG CGCACAGCCA GCGGAGGATT CCCGCCAGCA
ACACGCGCCG CACGCAAGCA GTCGATCCCG CCCGATCTGC TGCTGGCAGA GGCGCGTGTC
TACAGCGACC TGGCGCTCTG GGAACGTGCA TATCTGGCGC TTCACCTTGC CGGGGCGATC
GGGGATGCTT CTATCCGTGC CGAGGCGCAG ATCCTCTCTG CCGAGTTGCA GGTGCTCCAG
GGTGACTACG CCCGCGCTCA GCATGCGCTC AGATTCGTCG ATGTCAACAA CCTCGACAAT
CGATTGCGCC TGGAATACCA TGTCGCGGCT GCCCGCGCGC ATATTATGGC AGGAGAAGTT
GCCGCCGCCA TCACCGAACT CGAACGCGCG CATACGCTTG TCGCAACCCT GATCGACACC
GTCGATAACC CTGCCGCACT GGCGGATATT TACGACAACC TTGGCTGGGC ATACGCCGCG
CAGGGCGATC GTCCATCCGC CATTCGCTAT CTGAAACGCG CTGATGCCTG CTGGCAGTCT
TCCGGTAACC AGGGAAGACG CGCGCTGACC CTCAACAATA TGGGGGTGAT GGCGATGGAG
GAAGGGCGGT TTGCCGAAGC CCGCACAACA CTCGATCTGG GATTGGAGAT CGCCCGGCAG
ACAGAGTTAC GACGTGAAGA AACGGTTCTG CTGTGTAGTC TGGCAGAACT CGATCTGCGT
GAAGGCGATT TTGAACAGGC GATTCAGCGT TTTACCACAG CGCACGCCCT GGCAACCCGT
CTCGATATTG CCAGCAGCGT GGAAGCAGCC GCAGCGGGAG CGCTCTGGGC TGCCATACTT
TCCGACAACC TGACGCTCGC ACAGGCATGG CACGACACGG CAGCCTCCAT CGTGACACCG
CTACAACCGG AGGTGCGCGG ACGACTGGCA TTGGCACGCG CAGCGCTCGC GTTGCAATGC
CCGCACCCGG AATTTGCGTC TTTCGCCAGT TTATTAGCCG AAGCGACCAC ATACGAAGAA
TCCCTCAGCG AGGATGAGCG CATCTATATG GCGCTATTGC GTACTGAACT CGCCTTCGCC
CGGTCAGGCT GGCACGCAGC GGCATCGCTG TGGGAACAGT TCGCCGCACG CGCGGCCACG
CTGCCCGAAA CCCTGTGGCG CCGCTTTGCG TCGATGCATC GTCCCCTCTT CGAAGCCGCT
GCACCATACG ATCCGCGCGC CGGTCGCGCG ATTGCGCTGT CTCGCACAGC ATCTCCATCT
TCTGTACGCT GGCGAATAAC GACACTCGGC GGATTCGCGT GTCTGGTCGA TGGGAAACCG
GTCGATCTTT CGCAGTTGCA CCGCGCGCTG CTGGTGCGGC TCCTTGATGC CGGTCCGCAA
GGTCTGGCAG TCGAGCGGCT GTGGGAAGCG GTTTGGGGCG ACGATGTTAT TTCGATGCCG
GCGCTGCATC AGGCGCTGCG TCGGTTACGC CTGCAAACCG GACTCGCCGC TTCGGCGCGC
GAAGGCGCTG TAGCAATCCG CAGCGGTTGG GACGCGATTG AATACGATGT GCGTGAACTG
GAACGCATTC TTGAAACGCC TCCCAGCCTC GAATCCATCC AACGCGCAAT GACGCTCTAC
GGCGGTGAGT TTCTGCCTGG CGCCCCGGCA AGCGCTGCGC TTTGGGTCGA GGCGCGTCGG
GCGCACCTGC AGCAACGCTA CCTTGAGGCT ATTGAACAGT ACGCGCACTC CATCGAACAG
AACTTGCCGC AGCAGGCGAT GTTCTACTAT CAGCACGTGC TTCAGATCGA TGGATGCCGC
GAGCATACCG CCGCCCGGTT GATGCGCCTT GCGGCACGGT ACGGCAACCG CACCCTGGTC
GCCGCCACCT TTGAGCATCT GAAAGGATCG TTACGCGCGC TCGGCGCCTC ACCAGAACCG
GCAACCACTG CACTATACCG GCAACTGACC TGA
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| Protein sequence | MTLRFQQKLV VPTSARPLIE RPNVLAQLDR AIRSKRVVAL AAPAGWGKTT ALAQWVAQRT
MPVAWYTLDS ADRDPHVFLD YLLHSVADFV PGAPGIAARL AETTPQGLAE MIHQVALAFA
DAPEHFALIL DDVHVLDDDQ AQSIPGVSLV FTLLASIAEY ASHCHLVLAS RTLPVLHGMV
RMVAQQRAAV FDYSVLQFHR DDTQRLAGIT SGLILSDEAA EQLTASVGGW VTGIVLSLDQ
PVAHKDGMTG QQVVDRHLMH VPTPEEAVIE ANTSQVYAYF AEQILAPLPA DLQRFLEDTS
VLHDLSPQRC DILRSADNSA EYLDEIRRRG LFVSSRAGWL SYHSLFRDYL RSRLARDPQR
CRQLLRSAGD LYAAEDDIER ALDCYLAAGD DQHAIDLIRS AVPRLRQCSR QTTLLTCFER
LHRARRTNDQ RTASGGFPPA TRAARKQSIP PDLLLAEARV YSDLALWERA YLALHLAGAI
GDASIRAEAQ ILSAELQVLQ GDYARAQHAL RFVDVNNLDN RLRLEYHVAA ARAHIMAGEV
AAAITELERA HTLVATLIDT VDNPAALADI YDNLGWAYAA QGDRPSAIRY LKRADACWQS
SGNQGRRALT LNNMGVMAME EGRFAEARTT LDLGLEIARQ TELRREETVL LCSLAELDLR
EGDFEQAIQR FTTAHALATR LDIASSVEAA AAGALWAAIL SDNLTLAQAW HDTAASIVTP
LQPEVRGRLA LARAALALQC PHPEFASFAS LLAEATTYEE SLSEDERIYM ALLRTELAFA
RSGWHAAASL WEQFAARAAT LPETLWRRFA SMHRPLFEAA APYDPRAGRA IALSRTASPS
SVRWRITTLG GFACLVDGKP VDLSQLHRAL LVRLLDAGPQ GLAVERLWEA VWGDDVISMP
ALHQALRRLR LQTGLAASAR EGAVAIRSGW DAIEYDVREL ERILETPPSL ESIQRAMTLY
GGEFLPGAPA SAALWVEARR AHLQQRYLEA IEQYAHSIEQ NLPQQAMFYY QHVLQIDGCR
EHTAARLMRL AARYGNRTLV AATFEHLKGS LRALGASPEP ATTALYRQLT
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