Gene RoseRS_2321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2321 
Symbol 
ID5209288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp2874613 
End bp2875389 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content56% 
IMG OID640595926 
ProductNi/Fe-hydrogenase, b-type cytochrome subunit 
Protein accessionYP_001276650 
Protein GI148656445 
COG category[C] Energy production and conversion 
COG ID[COG1969] Ni,Fe-hydrogenase I cytochrome b subunit 
TIGRFAM ID[TIGR02125] Ni/Fe-hydrogenase, b-type cytochrome subunit 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACGAC GTGTGTATGT CTGGGAGGTC CCGGTTCGCC TGACGCACTG GGTGAATGTG 
GTGAGCATCG TCATGCTCTG CTTCAGCGGC TATTACATTG CCAATCCGTA CATCTTCGTG
AGCACGCGCG AACCGTGGGG CGTCTACTTC ATGGGAACGA TGCGGTTCAT CCATTTTGCG
TTCGCTTACA TCTTCGTGGC GAGCCTGATC CTGCGCACCT ACTGGGCATT TGTCGGCAAT
CAGTGGGCAA GCTGGCGTGG GTTGTTCCCG TTTCTCACGG CGGAAGGGCG CAGAAATATG
TGGCATGCCG TGCAATACTA CTTTTTCCTG CGTCGCAATC CGCCGGAGGT TGCCGGACAC
AATGCGCTGG CAGGCACGTC GTACATGATT ATCGTTCTGC TGTACGGCTT GAGCGTGTTC
ACCGGCTTTA CCATCTATGG CCAGTTGCAT CCCGCGAGCA TCTGGTACAC GCTCACCGAT
TGGGTGACAT CACTGGTGTC ACTCCAGACC CTGCGCCTCG CTCATCATAT CATTATGTAC
CTCATTCTGG CGTTCGTGGT GCACCATGTG TATGCAGCCT GGCTGATCGA CATGGAAGAG
GGAAATGGCT TGATGTCGAG CATTTTCAGC GGCTATAAGT TCCTGCCCAG GAATCAGCAG
CCGGACTGGA TCGAGCAGGT TGTTGCGCGG AACGGGAAGC GCAACAATCA CGCACTGAAG
GTTGCAAATC CAGGGACCCA GGCGCGGAGC ATTGGGGCGA AAGGCGGCGA GGGATGA
 
Protein sequence
MRRRVYVWEV PVRLTHWVNV VSIVMLCFSG YYIANPYIFV STREPWGVYF MGTMRFIHFA 
FAYIFVASLI LRTYWAFVGN QWASWRGLFP FLTAEGRRNM WHAVQYYFFL RRNPPEVAGH
NALAGTSYMI IVLLYGLSVF TGFTIYGQLH PASIWYTLTD WVTSLVSLQT LRLAHHIIMY
LILAFVVHHV YAAWLIDMEE GNGLMSSIFS GYKFLPRNQQ PDWIEQVVAR NGKRNNHALK
VANPGTQARS IGAKGGEG