| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2316 |
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| Symbol | |
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| ID | 5209283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 2865020 |
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| End bp | 2866621 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640595921 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001276645 |
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| Protein GI | 148656440 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAAGAA TAATACCCTG GATCGGACTG ATCCTGGCAG TGCTGCTCAC GGCGTGCAGC
GCAACTCAGG CGGCGCAGGA GCCGCCGACT CCAACCCCAT TACCGCCCGA TCCGGCGCTC
GAACGACCGA CGTATACCGT CCGGCGCGGT GTGATTGAGC GCGTCTTTAC GGTTACGGCG
CGCGCCACGC CGGTTGATAT GGTGCGTCTG GCGTTTCGCC GCGATGGTCG TGTGAACATT
GTATCCGTCA GTCGCGGCGA CGTGGTGAAA GCGGGAGATG TGCTGGCGGA GTTGCAACAG
GAGGAAGCCC TCGATGAACT CCGGCGCGCC GAGGACGATC TGACGCAGGC GCGGCGTGAC
CTGGAGAGCG CACGCCTGGC GAAGGAGAAG CGAATCAAAG AACGCGAACT CGGCGTCGAG
CGTGCGCGGC GTGACCTGGA GCGGTTGCTG CCAGGCGGCG AAGCCGACCT CTTCAAGGAG
TTGCAGGATC GACTGGAAGC CGCGCAACGC GATCTGCGCA ACGCGCGCGA CGACGCATCG
TGGGCGAAAA CGTCGGCTGA GGAAGCGCTG CGTGACAGCG CCGAAGCGCT GTCGGACACA
CAGAAAGCGT ACAGTGTCGC ATACTGGAAC TGGGACTGGG TGCAGCGCTA TGGCACCGAT
CCCGACAACC CGTTCATCAA GAATGAAGCG GGTGTGCTGG TTCCCAATCG CCTGACCGAG
AAGCAAAAGG AAGAGTACCG CGATAAGTTG ACGCAGGCGG AGCGCGCTTT GCGCGACGCT
GAGCGTAACC TGGAGCAGGC GCAGCGTGCC CGTGATCGTG CGTTCGATGA CGAGGTGGTT
CGGGTGCGTG AGGCGGAGAA GAAAGTCGAG GAAGCGCAGC GCGCAGTCGA TACGCTGCTG
CAAGGGCGGA ACAAAGTGAT CGAAGACGCA CAACGCGCGC TTGAGCAGGC ACAGATTGCG
CTTGAAGAAG CCCGGAGCGA AACGCTCAAC AGCGCCATCC GCGCAGTGGA GAATGCTGAG
CGCGCGCTGG AAAAGGCGCG CCGCCGCGTC GATGACGGGC GGGTGATTGC GCCACAGGAC
GGCACGGTTC TGGCAGTCGC TATCGAGCCG GGTGTAAGTG TCACCGCGTT TGAGCCGGTT
ATCGAAATTG CCGATCCGTC GAACCTGGAG TTTGCGGCGA CTCTCAGCGC GCAACAGATG
CGCCTGTTGT CGGAAGGGCA AAGTGTTGAG ATTCGCCTCC TCTCGCGCCC CGATCTGGCG
ATCCCCGGCA TCATTCGCCG TATGCCGGCG CCCTATGGCT CCGGTGGGAG CGGCGCAGTG
CAGGATCGTG ATGCGACCAC GCGCTTTCAG GTTGTGGATG CGCGTGGTCA GCAGTTCGAG
GCTGGCGTGA CGGTTGCGCG AGTCAGTATT GTGCTGGAGC GGAAGGAAAA TGCGCTCTGG
TTGCCGCCGG AAGCCATTCG CTCGTTTGAG GGTCGTCGTT TCGTCATCGT GCGTGAAGGG
GAGCGTGAAC GCCGTGTCAC CGTGCGGGTC GGCATCGAAA CCGAAGAGCG CGTCGAAATC
CTCGAAGGAC TGAGCGAAGG CGATATCGTG GTCGGATCAT AG
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| Protein sequence | MRRIIPWIGL ILAVLLTACS ATQAAQEPPT PTPLPPDPAL ERPTYTVRRG VIERVFTVTA
RATPVDMVRL AFRRDGRVNI VSVSRGDVVK AGDVLAELQQ EEALDELRRA EDDLTQARRD
LESARLAKEK RIKERELGVE RARRDLERLL PGGEADLFKE LQDRLEAAQR DLRNARDDAS
WAKTSAEEAL RDSAEALSDT QKAYSVAYWN WDWVQRYGTD PDNPFIKNEA GVLVPNRLTE
KQKEEYRDKL TQAERALRDA ERNLEQAQRA RDRAFDDEVV RVREAEKKVE EAQRAVDTLL
QGRNKVIEDA QRALEQAQIA LEEARSETLN SAIRAVENAE RALEKARRRV DDGRVIAPQD
GTVLAVAIEP GVSVTAFEPV IEIADPSNLE FAATLSAQQM RLLSEGQSVE IRLLSRPDLA
IPGIIRRMPA PYGSGGSGAV QDRDATTRFQ VVDARGQQFE AGVTVARVSI VLERKENALW
LPPEAIRSFE GRRFVIVREG ERERRVTVRV GIETEERVEI LEGLSEGDIV VGS
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