| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2313 |
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| Symbol | |
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| ID | 5209280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 2857849 |
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| End bp | 2860554 |
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| Gene Length | 2706 bp |
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| Protein Length | 901 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640595918 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001276642 |
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| Protein GI | 148656437 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.708196 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACGTA TATGGTTCCT GGTTCTTGCG GCAGTGCTGC TGGCATCATG CGGCGCGCCG
CAGCCATCGG GCGTGGCGAC ACCGGCGTCG CCGCGCGGAA CGCCGTCAGC CGGTCAGAAC
GAGAAGGTCA CGATCTCATT TGCGGTATGG GAGTATGAAC GCAGCGTCTA TCAACCGCTG
GCAGAGCGGT TTATGTCCGA ACATCCTGAC ATCAACGTGG TGCTCGTATC GCTTGACGAT
ATCACAATAA ACGAACCTGC CAGTTCGCTC GACCAGTTGC GCCAGGTTGT GTCGGCTGCC
GATACTGCCC TTGTCCCTTT TAGTTACGAT ACCGAAGAAT TTGCGGTAAC TCCAGATGCA
TTCGGCACGC CTTTGCTCCT CGACCTGAAG CCGCTGATGG ACGCTGATGC GACCTTTCAG
CGCGACGATT TCTTTCCCGG AACCATCGAG CGCTATGCCG CGAAGGGCGG CATCTGGGCG
CTGCCGCGCC TCCAGTGGGT GTCGCTAATG GTCTACAACC GCACCCTGTT CCAGAACGCC
AATCTCCCGG AGCCGCGCCC CGGATGGACG TGGGAAGAGG TGCTGGCAGC CGCCGAGCGA
CTGACCGGGC GCAGCGGCTC CACCAATCTG ACCTACGGCC TGGTGGAGCC GAGCAGGGGT
ATATTGCCGC TACTGGGATT GCTCAGCGCA CAGGGCGTCG ATGTGCTGAA CGCAGCGCCA
ATGGAAACCG ATCTGACCGC GCCGGAGTAT GTCGCCGTCC TTGAACGCCT GCGCGATCTG
TACCGCCGCG GCGTCCTGGT CGAACCATAC CCACGCAGCG GTCCCGCCAA CGACCCCGCG
CAGTTGGTGC GTGAAGGGCG CGTGGCGATC TGGAGCGATA TGCCCTACAT CAGCAACGAC
GACAGCACGC GATGGACGCC GGACTTTCCG GTGGGGCGCG TCCCGTTCCC GGCGTCGGAA
CTGAGTCTGC CCTTTATCGG CTCTGGCGAC ACGTTCATCA TCAGCGGCGG CACGGCCCAC
CCGGAAGCCG CCTGGCGCTG GATCGGGTGG CTGTCGCGCC AGCCGACCTG GCACCCGGAA
TATGAAGCGA TCATCGGTCT TATTCCGGCG CGGCAATCGT TGGCGCAGCA GACCGACTTC
TGGCGCAATC TCGACCCGCA GACTGCCGAG GCGTACCGCT GGACGCTGGC GAACAGCAAG
CCGGTGCCGG AGGCGCTGTT CAGGGCCAAC GTTATAGGCG CGTTGATCGA GGCGATGCAG
ACCGCGCTCA GCGACCCGAA GGCGAATGTA CGTCAGGCGC TGGCGGAAGC GCAGCGTCAG
ATGCAGGAAT CCATCGCCCG ACAGGAACTC ACGCCGACGC CCAAGCCCAA CCTCAACCCG
GTGGTGGTGG CGACGCCGAA GCCACAGGAA GCGCCGGTCG GCGCAACAAC CATCACCTTC
AGTATGTACG GCTACGATTC GTCTGCGTTC CGTCAGATTG CGCGCGCCTT TCGCGAACAG
CGCCCCGACA TCTTCGTGCA GGTGCAACCG TTCGAGTGGA CCCCGGACAC GCCGCAGGTG
AGCGCCGCGA CGCTGGCGCA GACCAGCGAT TGCTTCTCCT GGAGCAGACC GCTCCAGACC
AGCGATTACC CGGCGCTGCT CGACCTGCGC CCGCTGCTCG ACGCCGACCC CGCCTTCCCG
CGCGATGATT TCCCGCCGGC GATGCTGGCG TACTACAGCA ACGACGGACG CCTGTACGGG
CTGCCCTACA TAATCGGCAT GCGCGTGCTC TCGTACAACT ACGCCGCGTT CGAAGCCGCC
GGGCTGCAAC CGCCGCGCGC CGACTGGACG CCGGACGATT TTCTGGCGGC GGCGCAGGCG
TTGACGAAAG GCGATGGCGA GCAGCGGCAG TGGGGCTACA TTCCCCTGGG CGGACCGCAG
GCCGATCTGC TTTTTTTCGT CGGTCAGTTC GGCACAAGCC TGACGGTCGG CGACGGGAAA
GACCTGCGCC CCAACTACAC CGACCCGCGA ACGGTCGCCG CCATTCGCTG GTACCTCGAC
CTGAGCGCCG TCCACAAGGT GACGCCGCCG TTCAAGTTTC GCTACCGGCG TGATGATCCC
GGCGGCAAAG ATCGTTCCTA TGAATTGATT CAGTCGGGGC GGGTTGGGAT GTGGCTGGGG
CGTGGCGGCG AGATACCGCC GGACAGTGAC ATCCGGATTG CGCCGTTGCC GGTGGGCAAG
GCGGGATTGC CCCCCGACGA GGTGTTTGCG CTCGGTCTGT TCATCTCGGC GAACACACAA
CAGGCGCAGG CGTGCTGGGA GTGGATCAAG TTCCTCTCCG GGGATGCGAC AATGATGTAC
GGGTATACGA TGTTGATCGG CAATATGCCT GCCCGCCGTT CGATTGCGCA GTCGGAGGCG
TTCCTGAAAC AGTTTCCGCT GGGGCGCGCA GGAATGCTCG ATGCGTTCGA CGCAGCGCTG
GCTGTGCCGG TGCGCACGAC GGTCGCGAGC AGCGCGAATG CGATCTACAG TCTCTCTCAC
GACTCGTACT GGCTCTTCCA GGCGCTGAGC AACACGCTGG AGAAGGGGGC GAATCTCGAA
CAGGAACTCG CTACTGCGCA GCGGCTCGCC ACGGCATTCG CCGAATGTAT GAACCGTGAC
GGCGCAAAGG CGGCGCAATG TGCGAGAGAG GTCGACCCCA ATTACAAGGG GTACAATGTC
GAGTAG
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| Protein sequence | MQRIWFLVLA AVLLASCGAP QPSGVATPAS PRGTPSAGQN EKVTISFAVW EYERSVYQPL
AERFMSEHPD INVVLVSLDD ITINEPASSL DQLRQVVSAA DTALVPFSYD TEEFAVTPDA
FGTPLLLDLK PLMDADATFQ RDDFFPGTIE RYAAKGGIWA LPRLQWVSLM VYNRTLFQNA
NLPEPRPGWT WEEVLAAAER LTGRSGSTNL TYGLVEPSRG ILPLLGLLSA QGVDVLNAAP
METDLTAPEY VAVLERLRDL YRRGVLVEPY PRSGPANDPA QLVREGRVAI WSDMPYISND
DSTRWTPDFP VGRVPFPASE LSLPFIGSGD TFIISGGTAH PEAAWRWIGW LSRQPTWHPE
YEAIIGLIPA RQSLAQQTDF WRNLDPQTAE AYRWTLANSK PVPEALFRAN VIGALIEAMQ
TALSDPKANV RQALAEAQRQ MQESIARQEL TPTPKPNLNP VVVATPKPQE APVGATTITF
SMYGYDSSAF RQIARAFREQ RPDIFVQVQP FEWTPDTPQV SAATLAQTSD CFSWSRPLQT
SDYPALLDLR PLLDADPAFP RDDFPPAMLA YYSNDGRLYG LPYIIGMRVL SYNYAAFEAA
GLQPPRADWT PDDFLAAAQA LTKGDGEQRQ WGYIPLGGPQ ADLLFFVGQF GTSLTVGDGK
DLRPNYTDPR TVAAIRWYLD LSAVHKVTPP FKFRYRRDDP GGKDRSYELI QSGRVGMWLG
RGGEIPPDSD IRIAPLPVGK AGLPPDEVFA LGLFISANTQ QAQACWEWIK FLSGDATMMY
GYTMLIGNMP ARRSIAQSEA FLKQFPLGRA GMLDAFDAAL AVPVRTTVAS SANAIYSLSH
DSYWLFQALS NTLEKGANLE QELATAQRLA TAFAECMNRD GAKAAQCARE VDPNYKGYNV
E
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