| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2312 |
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| Symbol | |
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| ID | 5209279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 2854348 |
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| End bp | 2857596 |
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| Gene Length | 3249 bp |
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| Protein Length | 1082 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640595917 |
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| Product | peptidase S41 |
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| Protein accession | YP_001276641 |
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| Protein GI | 148656436 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[S] Function unknown |
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| COG ID | [COG0793] Periplasmic protease
[COG4946] Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.481981 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGAAC AGTATCCTGC ACGTCCCTAT CTCCGTGCGC CTTCTCTTGA TCCCACGGGA
AATCGTGTCG CATTTGTGTA CGCTGGCGAT ATCTGGCTTG TGGCTGCCGA TGGAGGTCGC
GCCGAGCGAT TGACTGCCCA TCCTGCCGGT CATATGCTCC CGCGCTGGTC GCCCGATGGC
GCGGCAATCG CCTGCACCTC GACGCGAACC GGTCAGGGGG ATGTGTATGT CGTGCCGCTC
GACGGCGGTG AGGTGCGTCG GGTGACGTAT CACGACACGC AGAGCGCCGT TGAGTGCTGG
TCGCCCGATG GCAACGCCAT CTATTTCACC TCGCAACGCG AGCGCCAGGG AACAGCGATC
TATCGGGTTG CCATTTCGGG CGACACACCG ATCCGCTGGA TCGCGCAACC GTATGAGCGC
CTCGGCACCG TGTCCGTTTC GCCGTGCGGT CGCTGGATAG CGTTCAGCCT GCTGCGCGAT
CCGTGGTGGC GACGCGGACC AAACCCCTAT GGCGGTGCAG AACTCTGGCT GGCATCGAAC
GCGCCGGACG CCGACGATTT TCAGAGATTG AGCGATGCAC CCGGATTGAA TTACTGTCCG
ATGTGGACGC CTGATAGTGG GTTGATCTAC TTCGTTTCTG ATCGCGATGG GTGTGAGAAT
CTGTGGGTTG TCCCGCGTGA TGGGGGTGTC GCCGAACGTG TGACCTCGTT TACGGACGGT
CGTTTGCTCT GGCCCTCGAT CAGCGCTGAT GGCAAAAAGA TTGCGTTTGA GCGCGATTTT
GGCATCTGGA TCTTCGATCT TACCTCCGGC GATATGGCGC CGATCCCGAT TACTGTGCGG
CAGGATGCGA AATTGACGCC GGTGCGGGTA CAGACATATA CGCGCGATGT GCAGGAACTG
GCGCTCTCAC CCGATGGCAA GAAAATTGCG TTCATCGTGC GCGGCAAGAT TTTTGCCGAT
TTCGCCGACA AAGAGAATGA GCGTGATCCA CGCCAGGGAC TGGCGTACCG CGTCTCTCAG
ACGGCGTTCC GCGATAGTGA TGTTTCCTGG TCGCCCGATA GCCGCAGCCT GGTGTATGTC
TCTGACCGTC ATGGCGACGA GGAGGTGTAC CGCTACGACT TTCCCGGTCG TAGTGAAACA
CGCCTGACGT ACGGACCAAA GCGCAAGAGC GCGCCCTGCT TCTCGCCGGA TGGGCGCTGG
ATCGCCTATG CCAGCGGAGA TGACGAGATT CGATTGATCG ATGTTGTCAG TGGCGCCGAC
CGCGGGTTCA TCCGGGCGCA CTTTGTGTTC GGCGCGTCGT TCTCGTGGTC GCCCGATAGT
CGATGGCTGG CATTCTGTGC CCAGGACGAG CGCTTTTTCA GCAATCTCTA TGTACAGCGC
ATCGATGAGG AACAGCCGCA CCAGATTTCG TTCCTCAGCA ACATTCAGGC AGCAGGGCCG
CTCTGGTCGC CGGATGGTCG CTTTATTGTC TTCACGACCG GACAGTACCG TGCCGAGTCG
CAGATTGCGC GCGTTGATCT GCAACCACAA CCGCCCATCT TTCGCGAGGC TGAATTCGAG
CGGTTGTTCG AGTCCGCTCA GAGCAGCACG CGCAAGAGCG AAAGTGCGTC GCGTCATGTT
GCGCATGTTC CCGACCATAA ACGCCATACC GATGCGGATC GCGAACCACT GCCGGTTCTT
CCCATCGTTG AACCCGATGG GCCACCCGAA GATGGAACAG TGCACGAGAG GGAAGGTTCA
AAATCGGTCA AAGCCTCCCA GACAGTCAAA GAGATCAGGA TCATCCTGAG CGGCATCGAA
CGTCGGTTAC GCCTGTTGAC ACCACCGCAA ATGGATGCAA CTGCACTGTG CATCAGCCCG
GATGGGCGCG ATCTGATCTG TAGCGCAACG GTTGCCGGGC GACAGAATCT CTGGACCTTG
CCGCTTGACG AAGCGCGCGC CGATCAGGGT CCACGGCAAC TGACCAACAC GTCCGGGCTG
AAATCGCATG CCTGGTTCGC TCCCGATGGC AAGAGCATCT GCTTCCTCGA CGGCGGAACC
ATCGCGGTGC GAAAATTCCC GAAAGGAGAG CAGACGACCC TCTCGATCAC AGCGGAAGTG
GTGATCGATT TTGCACAGGA AAAACGCCAG ATTTTCGAGG AGTGCTGGCG CCTGTTGCGC
GACTATTTCT ACGATGAACA TTTCCGTGGC GTCGATTGGC ATGCAATTCA CGATCAGTAC
GCGCCGCTGA TCCTGGGGGC GCAAACCACT GCTGAACTGT ATCTCCTTAT CAATTTGATG
ATTGGTGAAC TGCGTTCCTC GCACGCTGGC GTGGTGGGGA GCGGCGCCAG CGGACAGGAT
GGCTACCTTG GCATCACGCT CGATCCGGTT GAATATCTGC GGAGCGGACG CCTGCGCATT
GCCAGGGTCA TCCCGGATAG CCCGGCAGCA GCAGCGCCCA ATGGAGCACT TCAACCCGGC
GACGTCATCC TGGCGGTCAA TGGTGTTGCG CTGACGGGCG ATACATCGCT CGATGCGCTG
CTCCAACGAA CTGCAGGTCG GCGCGTCGTC CTGCGCGTCG TCGATCCGTC GGGATCGCAG
CGTGATGTCG AGGTGCGTCC GGTTTCAGCG GATCAGTACG ACTGGCTCTG CTACCGGGCG
TGGGTGTTCG ATAATGAACA GATCGTTCAC CGGGCAAGTG ATGGACGTCT GGGGTATGTG
CACATTCGCA AGATGAATTA CGACGCGTAC CAGCAGTTTC TCGCCGATCT CGATGTTGAA
GCGCACCACA AGGAAGGAGT CGTCATCGAT GTGCGCTTCA ACTCAGGCGG TCACACGGCG
ACGTTTATTC TCGATGTGCT GATGCGTCGC AGTTTGCTGA TGAGCACATT CCGCAATCGC
TCCACTGCCG ACTCGTCGCA CATTTTCGGT AATCGCGTGC TGAACAAGCC CACCGTCCTG
GTAACGAATG AACTGTCAAG TTCAAACACC GAAACCTTCA GTGAGTCGTA TCGCCGCCAG
GGGCTGGGAA AGGTTGTCGG ACGTCCGACG GCTGGCGCGG TGATCGGCAC ATTCACGCGG
CGACTTATTG ATGGGTCGTC GATCAAACTG CCGCAACTCC GGGTCACGAC CCCGGAAGGC
GAAGACCTGG AAGGTCATGG ACGACCGGTC GATGTTGATG TACCGCTGCG TCTTGGGGAA
TGGCGCTATG GACGTGATGT GCAACTTGAA GCGGCGGTGC GCGTTCTGCT GGACGACCTC
GATAGATAA
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| Protein sequence | MTEQYPARPY LRAPSLDPTG NRVAFVYAGD IWLVAADGGR AERLTAHPAG HMLPRWSPDG
AAIACTSTRT GQGDVYVVPL DGGEVRRVTY HDTQSAVECW SPDGNAIYFT SQRERQGTAI
YRVAISGDTP IRWIAQPYER LGTVSVSPCG RWIAFSLLRD PWWRRGPNPY GGAELWLASN
APDADDFQRL SDAPGLNYCP MWTPDSGLIY FVSDRDGCEN LWVVPRDGGV AERVTSFTDG
RLLWPSISAD GKKIAFERDF GIWIFDLTSG DMAPIPITVR QDAKLTPVRV QTYTRDVQEL
ALSPDGKKIA FIVRGKIFAD FADKENERDP RQGLAYRVSQ TAFRDSDVSW SPDSRSLVYV
SDRHGDEEVY RYDFPGRSET RLTYGPKRKS APCFSPDGRW IAYASGDDEI RLIDVVSGAD
RGFIRAHFVF GASFSWSPDS RWLAFCAQDE RFFSNLYVQR IDEEQPHQIS FLSNIQAAGP
LWSPDGRFIV FTTGQYRAES QIARVDLQPQ PPIFREAEFE RLFESAQSST RKSESASRHV
AHVPDHKRHT DADREPLPVL PIVEPDGPPE DGTVHEREGS KSVKASQTVK EIRIILSGIE
RRLRLLTPPQ MDATALCISP DGRDLICSAT VAGRQNLWTL PLDEARADQG PRQLTNTSGL
KSHAWFAPDG KSICFLDGGT IAVRKFPKGE QTTLSITAEV VIDFAQEKRQ IFEECWRLLR
DYFYDEHFRG VDWHAIHDQY APLILGAQTT AELYLLINLM IGELRSSHAG VVGSGASGQD
GYLGITLDPV EYLRSGRLRI ARVIPDSPAA AAPNGALQPG DVILAVNGVA LTGDTSLDAL
LQRTAGRRVV LRVVDPSGSQ RDVEVRPVSA DQYDWLCYRA WVFDNEQIVH RASDGRLGYV
HIRKMNYDAY QQFLADLDVE AHHKEGVVID VRFNSGGHTA TFILDVLMRR SLLMSTFRNR
STADSSHIFG NRVLNKPTVL VTNELSSSNT ETFSESYRRQ GLGKVVGRPT AGAVIGTFTR
RLIDGSSIKL PQLRVTTPEG EDLEGHGRPV DVDVPLRLGE WRYGRDVQLE AAVRVLLDDL
DR
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