| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2304 |
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| Symbol | |
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| ID | 5209271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 2845425 |
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| End bp | 2847464 |
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| Gene Length | 2040 bp |
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| Protein Length | 679 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640595909 |
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| Product | signal transduction histidine kinase, nitrogen specific, NtrB |
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| Protein accession | YP_001276633 |
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| Protein GI | 148656428 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTCAC AGGTCCAAAA AGTCTCCGCC TCCACAGATA CTGTTCATGC CCATACCTTT
CCGGTTGATG AGCGCATGCG CGTTTATGCA CATGTTTTCG AGGCGATTGG TCAACCGCTG
ATCGTGACCG ATCTGACCGG TTCCATCGTG TACTGGAATG GGAGTGCAGC AACGGTCTTT
GGCAAACGTC GGGACGAGAT GGTCGGTCGG TCGGTGATGG CGGTAGCGGA TGGTGACGAA
TGGCGCTTGA AAATTACGCA TGTATTGGAA GAGGTTGGGC AGCGAGGTCA GTGGAATGGC
GAATTGATGG TGCAGCGGAG TGATGGCGTA CAGGCGTCAG CGGTTGTCAA TGCGCGTCTC
TGGCATCACG AGCGGGATCA GGACGCGATC GTCATTCTTG TGACCGGTAT CAACCGGCAA
AAACGATCTG AGTCGTATAC GGGTCGACGA GTGATACGCA GGCGACGTCG GAACGCTGAT
CTTCCGCGCC GCTTCAAACG TCGCCTGAGC GGGGTACGTC GCGCGAACCG TTGGTTGCGG
CGCGAGATTG CTGAATACAG GCGCAATGAG CAAGAACTTC GTTTTCAGGC AAAACTGCTG
GCGACTGTCA GCCAGGCGGT GCTTGCGACC GACACGTCGG GGGTGATTAC CTACTGGAGT
CCATCCGCTG AGCGCATGTT CGGTTGGAGC GCTGCCGAGA TGATCGGTGC AATCGGGTTT
TATCTGGTGG CTGGTCTGCC GGATCTTGAA CTTATTGGCG CAATGCGCGC GGCGATTGGC
GCTGGCAAAC CGTGGGAAGG CGAATTTATG CTGAGACGCC GTGATGGTAC TGTTTTCCCT
GCATATGCCG CGATTTCTCC GATCTTCGAT GAGCAGAATC GGCGTATCGG CGCAGTTGGC
GTCGTCAGCG ACATAACTGA GCGAAAACGT GATCAGCAGG CGCTGGCGGA CGCCAATGTC
CGTCTTCAGG CAGCCAACGC CGACCTGCAG TTGAGTCATG ACCTGTTACA CACGATTGTT
GACAATCTGG ACGATGGGCT GGCATTGATC GATAGTCAGC GCGTTATTCA GGTGGTCAAT
CGTCAGTTTG CACGCCTGCT CGAGATGCCG CCGGAACATC TTCCTGGCGC ATCGTGCGAT
GATGTTTGCC CGGTGGTTGC GCCGATCGTC GCTCGCACCC TGAGTGGAGG CGTGAAGTCG
TTCGAGCGCG TCTCTCATGC CCATCCATCG GGTGAGGTGA TAACCCTGGA TGTCTACGGT
ATTCCATTGC GCGACGCGAG CGGCGCGCAG CGCGTGGTGC TGCGCCTGGT TGATGTGACT
GAGCGGCTGC AACTCGAAGC GATCATGCGG CAGAACGAAC GCCTGGCGGC GAGCGGTCGC
CTTGCGGCGG CAGTCGCGCA TGAGATCAAC ACGCCGTTGC AGTCCATCCA GAATTATCTG
TACCTGCTGC GTTCATCGTC CATCGAGCAA TCGACAGCGT TTCTCGATCT GGCGAGCAGC
GAGATAACGC GTGTCTCAAC GTTGTTGCAT CGCCTGCTCG ATCTCCATCG TCCCGGTGAT
CGTTCGATCG AGCTGATCGA TAGCAATGCG ATCATTGAAC GGGTCGTCTT GTTGTTGGGA
AGCGCCCTGC GTGGGTGCAG CATTCGCGTC GAACAGGAAC TGGCGCCGGA TCTGCCGCGG
TTTTTAGGGC AGCGCGATGC GCTGATGCAG GTGTTGCTCA ACCTGCTGCT GAATGCGATC
GACGCGATGC CGTGCGGTGG CGCCCTGCGC ATTACAACAC GTCGGGCGCT TGAAACCATC
GATCAATCTG CACGCTGGTG CGTGCAGATT ATCGTCGCAG ATAACGGTCC TGGAATCGCA
TTCGATCTGC AGGAACGAAT TTTTGATCCG TTCTTTACGA CAAAGCCACA CGGGTCGGGT
CTTGGGCTGG CAGTCAGTCG TCAACTCGTT GAACAGCACG GTGGATCGTT GCGTGTACAG
AGCACTCCTG GCAATGGCGC CACATTTATT GTCTCGCTGC CGGTTGCAGA GGATGCGTGA
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| Protein sequence | MPSQVQKVSA STDTVHAHTF PVDERMRVYA HVFEAIGQPL IVTDLTGSIV YWNGSAATVF
GKRRDEMVGR SVMAVADGDE WRLKITHVLE EVGQRGQWNG ELMVQRSDGV QASAVVNARL
WHHERDQDAI VILVTGINRQ KRSESYTGRR VIRRRRRNAD LPRRFKRRLS GVRRANRWLR
REIAEYRRNE QELRFQAKLL ATVSQAVLAT DTSGVITYWS PSAERMFGWS AAEMIGAIGF
YLVAGLPDLE LIGAMRAAIG AGKPWEGEFM LRRRDGTVFP AYAAISPIFD EQNRRIGAVG
VVSDITERKR DQQALADANV RLQAANADLQ LSHDLLHTIV DNLDDGLALI DSQRVIQVVN
RQFARLLEMP PEHLPGASCD DVCPVVAPIV ARTLSGGVKS FERVSHAHPS GEVITLDVYG
IPLRDASGAQ RVVLRLVDVT ERLQLEAIMR QNERLAASGR LAAAVAHEIN TPLQSIQNYL
YLLRSSSIEQ STAFLDLASS EITRVSTLLH RLLDLHRPGD RSIELIDSNA IIERVVLLLG
SALRGCSIRV EQELAPDLPR FLGQRDALMQ VLLNLLLNAI DAMPCGGALR ITTRRALETI
DQSARWCVQI IVADNGPGIA FDLQERIFDP FFTTKPHGSG LGLAVSRQLV EQHGGSLRVQ
STPGNGATFI VSLPVAEDA
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