| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2283 |
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| Symbol | |
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| ID | 5209250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 2818235 |
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| End bp | 2819962 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640595888 |
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| Product | polymorphic outer membrane protein |
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| Protein accession | YP_001276612 |
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| Protein GI | 148656407 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01376] Chlamydial polymorphic outer membrane protein repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGTAT ATATCATCAT GCTCCTGCTT GGCATTGGTA TGCTCCTTCC GACGCCTCCC
GCGCACGCTG CCGGTGTCGT CGGTGATGGA ACGCCGGCGA GTTGCACGCG CGATGCCCTG
GCGGCGGCGC TGGCTTCGGG TGGCGAGATC CGCTTCAACT GCGGCAGCGC GCCGGTGACT
ATCCCGATTG CGGCAACCCT CGATATTCGC ACTGCGGCAA CGATCGATGG CGGAGGATTG
GTGACCCTCG ATGGTCAGGG AACGACCCGT ATCATGTATG TTAACAAACT CAGCGCCGGC
ACGAAATTGA CGCTGCGCAA CCTGACGCTC GCCAACGGTC GATCAAGCGG GTTCGAGCCG
TCGTTTGGCG GTTGCGTCTA TGCACGCCAG AGCGCCGTCG ACCTGATCGA TGTCACGTTT
ACCGGTTGCA GGGCGGGCAA CGGTGCTGCG CTCTATGTCT ACGGCGGCGC ACTGAAAGTC
GAACGCAGCA CGTTCATCGG CAATCACGCC AGCGATGGCG GCGCGATCTA CGCGCTTCAG
GGCGGCCGCG TCGTCATTCG CAACTCCACC TTTGCCGCCA ACACATCCAC TGGCGATGGC
GGCGCCATCT TCATGGACAA CTCGCCGCTC GAAGCGTATG CTTCCCTGTT TGAAGACAAT
CAGGCGCAGG GGACGCAATC TCAGCCAGAT ATCGGTTTAG GCGGCGCGAT CTATGGCAAC
AATCCCGGCG CAACCATAAC GATCGTCGGC AGTCAGTTTC GCCGGAACTA CGCACGACTG
CAAGGTGGCG CGCTGTTCGC CGACTACAAC GTCACGCTCC GCGTCCAGAC CAGCAACTTC
AGCAATAACC GCTCTGGTTC GCAGGGAGGG GCGCTGGGAA CCTGGAAAGC ACAGGCGCAT
TTGCACTCGT GCACCTTTAC CGACAATGTT TCTGACGGCG GAGGCGGCGC AATTCTGAGT
GGTGAAGCAA CAACCATGGT CGTATCGGCT GGCACATTCA CCGGAAACAG CGCCGGGCGC
GATGGTGGCG CTCTGTACAA CTACACCGGT CCGCTAACAG TCAACGACTC GCTGTTCGAC
GCCAACCGCG CCGGTGTGGA CGGCAGGGGC GACACTCGTG GCGGCGCAAT TGTCAGTTAC
CGCGCGACGA TGACAATCAA TGCCAGCACC TTTACCGGCA ACCAGGTGGT CGGTCGTCAG
GGGTTCGGCG GTGCAATCGG GAACGCTGGC AGCGCTACCG TGGTCAACAG TACATTTTAC
GATAATGCCG CCGAATATGG TGGCGCAATC TACGGACTGC GCGACACCCG TGTGGTGAAT
GTCACCCTGG TGCGCAACCA GAGCGCAAAC GGCGCCAACC TGAACTGGGA GAGGACCACG
ACCATGACGC TCAGGAACAC TCTGCTTGTG CCTGGCTCGA ATGGGCGGAA TTGCATCCGC
GCTGTATCAA CCAGCGAAGG CGGCAATATT CAGGAGGGAG ATACGAGTTG TTTCCCCAGC
CAGCCGGTGG TGGCGCTTGG TTTGAGTGCT CCGGCGATGC ACGGCGGCGC AACGCCAACC
ATTGCTCTGC CACCCGGCGC TGCCGCAATC GATGTCGGGC GTGATTGCCC GCCCTTCGAC
CAGCGCGGCT TTCCGCGCGT TGGCGCCTGT GACAGCGGTG CATTTGAATT CGGCAGTTCC
GCGCCCAATT TGAGCGAAGC CGTTTTTCTC CCGCTCGTCG TCCGCTGA
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| Protein sequence | MRVYIIMLLL GIGMLLPTPP AHAAGVVGDG TPASCTRDAL AAALASGGEI RFNCGSAPVT
IPIAATLDIR TAATIDGGGL VTLDGQGTTR IMYVNKLSAG TKLTLRNLTL ANGRSSGFEP
SFGGCVYARQ SAVDLIDVTF TGCRAGNGAA LYVYGGALKV ERSTFIGNHA SDGGAIYALQ
GGRVVIRNST FAANTSTGDG GAIFMDNSPL EAYASLFEDN QAQGTQSQPD IGLGGAIYGN
NPGATITIVG SQFRRNYARL QGGALFADYN VTLRVQTSNF SNNRSGSQGG ALGTWKAQAH
LHSCTFTDNV SDGGGGAILS GEATTMVVSA GTFTGNSAGR DGGALYNYTG PLTVNDSLFD
ANRAGVDGRG DTRGGAIVSY RATMTINAST FTGNQVVGRQ GFGGAIGNAG SATVVNSTFY
DNAAEYGGAI YGLRDTRVVN VTLVRNQSAN GANLNWERTT TMTLRNTLLV PGSNGRNCIR
AVSTSEGGNI QEGDTSCFPS QPVVALGLSA PAMHGGATPT IALPPGAAAI DVGRDCPPFD
QRGFPRVGAC DSGAFEFGSS APNLSEAVFL PLVVR
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