Gene RoseRS_2280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2280 
Symbol 
ID5209247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp2815368 
End bp2816330 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content67% 
IMG OID640595885 
Producttransposase, IS111A/IS1328/IS1533 
Protein accessionYP_001276609 
Protein GI148656404 
COG category[L] Replication, recombination and repair 
COG ID[COG3547] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTCCC GTGAGTCGCT CTTTATCGGC ATTGATGTCT CCAAACAGAC GCTGGATGTG 
GCGTTTGGCG CCGACCCGCA CGCGCCACGC GAGACGATAC CGTCTACCGA CGAAGGTGTC
CAGCTCCTGG TCACGCGACT CCAGCGCCTG CAGCCGACCC TGATTGTGCT GGAGGCGACC
GGCGGGCTGG AGCGCATGGT GTTCGCCCAA CTGCTCCAGG CTGGCGTGCC GACGGCGCGG
GTGCAGCCAC GCCGCGTGCG CGCCCTGGCG CACGCGGAAG GACGCCAGGC GAAGACCGAC
CGCCTGGATG CCCGGTTGCT CGCCCGCTTT GCCGAACGGG TGCGCCCGCC GCACCACCAA
GCGACGGACG AGCAGCGCGC ATCCTTGCGC GACCTGCTGG TCCGGCGGGA GCAGGTGATT
CAGATGCGGA CGGCTGAGAT CAATCGGTTG ACGGCTGCCG CGCCGAACCT CCGCCCGGGC
ATCCAGCAGC ATATTGATTG GCTGGATCAG GAGATCCGTG CGCTTGAGCA GGAACGCGAC
AACGAGGCGG AGCGCACCGA CGAGGTGCGC CGGAAACGGG AGCTGCGCGA CAGCGTGCCC
GGCATCGGCG CGATCACCGC ACTGAACCTG CTGCTCCGCC TGCCCGAACT GGGGACCATC
AAGCGCAAGG AAGCGGCGGC CGTTGTGGGC GTTGCGCCGT ATGCCAATCA GAGCGGCGCA
CAGCACAAAC CCCGGCATAT CTCCGGCGGC AGGAGGGATG TGCGCAGCGT GTTGTACATG
GCGACCCTGG CGGCCACGCG GCGCCGTCTG GTCAGGCGCG CCTTCTATCA GCGCCTGTGT
CAAGCTGGCA AGCCGCGCAA GGTCGCCATC GTCGCTGCGA TGCGCAAGCT GCTGACTATT
CTCGGCGCAA TATTGCGTCA GCAAAAGCCC TGGGATCCGG CTGTGCATAC GAGCGCCCCT
TGA
 
Protein sequence
MASRESLFIG IDVSKQTLDV AFGADPHAPR ETIPSTDEGV QLLVTRLQRL QPTLIVLEAT 
GGLERMVFAQ LLQAGVPTAR VQPRRVRALA HAEGRQAKTD RLDARLLARF AERVRPPHHQ
ATDEQRASLR DLLVRREQVI QMRTAEINRL TAAAPNLRPG IQQHIDWLDQ EIRALEQERD
NEAERTDEVR RKRELRDSVP GIGAITALNL LLRLPELGTI KRKEAAAVVG VAPYANQSGA
QHKPRHISGG RRDVRSVLYM ATLAATRRRL VRRAFYQRLC QAGKPRKVAI VAAMRKLLTI
LGAILRQQKP WDPAVHTSAP