| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2258 |
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| Symbol | |
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| ID | 5209221 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 2780213 |
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| End bp | 2782906 |
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| Gene Length | 2694 bp |
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| Protein Length | 897 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640595859 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001276587 |
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| Protein GI | 148656382 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1205] Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.22294 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.971461 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATGA ATATTATCGC TATACGCTGT CGCAGGCATA ATCGGGGAGA AAATCCCAAG
TCATTCCGCT TATTGCAAAT CGCGCTTGAC CAGGGACAAA AAAGAGCGAT GCGCTATTTA
ACGGAAAAGG ATGGTAATAT TGTTAAAGGA GCTTGGTCAT ATACCTCTCG TCCGTTCGCC
CCTGGTTTAT ACTGCTTCCA TTGTCTTAAT GAAGGCATCC GCGAAATGAT ACCTGTTGAT
CTTGAAGACC TTCGTGATCT GGGTCTTTCA GATCTGCCAC TTGTGTTTCA GTCAGCGGAG
TCCTTTCAGG CGGTAACGCT TGTTAACTCC ATGATTAACA GGTATCAGGA CGCGATTCGT
AATATTCAGG AATTTCCTGC ACGTTCAGCC TCTTTTGATG ATAATAGAAT AATTAATGGT
CTGAATCCAG AACTTCAGCA CGTTTTGCAG AAGAAGGTGT TGCCCAAAGG TGGAAAACTT
TATTCGTTTC AGGCTAAGGC TATTGAGGTG GCGCTTAATG GTCACGATAT CATCATTACA
ACCCCTACCG CAAGTGGTAA ATCATTAGCG TATATACTAC CGGTGTTAGA GGCTACATTA
TGCTCTTCTG ATGCTACCGC GCTCTATATT TCGCCATTAG TGGCTCTGAC TGAAGATCAG
TTTGAAGCGC TTACGATTTT TGATGAGAGC GGTACAGATT GGATCAGGAA GGGTGAACGT
TTTTCTATTC ATCGTGTATG CCGGACGCTT GTGATAGGCT CTCGAAGAGT CACTATCGCA
CGTTATGACG GTTCTGTGCT GCCTGGTGAT CGGGAGGAAA TACGTCGGCG CCGTCCGCAG
TATGTTCTGA CAACCCCTGA TATGCTCCAT ATGGCTATGC TCAGAGGTGC GTTTGATGAT
CGACATTGGC GTTATCTTCT GGCAGGGTTG CGCTACATCG TAATCGACGA AATGCACATC
TATCGGGGTA TTCTTGGTGC CTCCTTCGCC AACCTGATAC GGCGGCTTCA ACGTTTGTGT
CGGTTGCATG GGACCAATCC GCAATTCTTA TGCGCGTCTG CGACCATGGT TGATCCGATT
GGAACCGTAG AGCGTTTCAT TGGTCGGCGT CCAGTCGGAG TTGATGGATC TGAGGATGGC
GTTCCCCAAC ATAAGCGTAT GGTGGTGATC TGGAGCAGCA GTGTCGATGA TGGTCAGGTG
TATGCAACAT CGACTCATGC TAAAAATGTG CTACTGCACC TTATAAGCGA ACGTGTCCGC
CATATCGCAT TCGCGCGATC AATTGGAGAA ATTAACGATA TTTATCGCTT TACTTCTGCT
GAGTTACGCG AACAAGGCAT TGACACGCCG CTTATCAAGC CATTTATGCG TGAACTGCGG
CCAGACGAGA AACGCGCCAT CATTCGAGAT CTTAAGGATG GCCGCCTTCA TAGTGTTATC
TCAACAACCG CTCTCTCGAT GGGTATTGAT ATCGGTAGTC TTTCGGCAGC CGTCATTATC
GGTTTTCCGG GATCGATCGC ACAATTCTGG CAGCAGGCTG GTCGTGCTGG ACGTGCTGGC
GAAGGTGTGA TCATCTTGAT TGCTGATCGA AATCCACTGG ACCAATTTTT TGTCCAGCAC
CCAGAGGTCT TATTCGATCT GAATGCAGAG CCAGTCTATT GCAATCCTGA CAATCCATAT
ATCGTGCGGA GCCATTTGTT GACAGCAGCG CGCGAATTTC CACTGAGTGA CGAAGATTTC
CATTTGTTCG GAAAAGCTGC ACTGGATCAA ATACAGACGT TGACCGCCGA GGGATTGATG
ACTTCTGATG GCATGGGTCG ATATGAATTG ACGGAATCTG CTAAAAATTT GGCTGATACG
CCTTTTCGCA GTCTCACGTT CGCTGTTCCG GTGAAGGATC AGGAAAAGCG TCTGATTGTC
GAAGTTGATG CAGCAAGAGC GCAGCGGGCT TTGCATCGCC ATGCACATTA TCAGCATATT
GATCGCTATT ATCGTGTTAT TTCCTGTGAT CTGGATTGGA GTCGAGGGCG TGGCGAAGTT
GTCGTTCAGG AGTTAGAACA TCCCGAATAT ACGACAGCTG CGCATGTTGA GATAGATATC
TCGATCATTG ACTGTCAGAT CCAGCGTGAT GATGAACATT ACGTCGTAGG GTACGGCATT
GTCAAGTGTC ATACCCGGGT TGATGGATAC TACGAAGTTC CGCTGTTTTC TCGTAATGAG
CCCTTCAAGT ATCGACCGCT CGGTCGCGCA GCACCTCCAC CGCTCGAATA TCAGACGCAG
GCATTCTGGC TGTTGCTTTC TCCGAAAGTA TTGGATGCAA TCTCGCCTGA TGAACGAGAA
GCCGCGATGT ACTCACTGGC AGGCGCGTTA CGGTTAGCGA CGTCTATAGA AGAATTGTGC
GACCTTTCAG ACGTCGAAGG CGTCGGAATG CTACACTTTC AGGATGTCCT TCGCCCCATG
GTGATGGTGT ATGACACGGT TCCTGGAGGT GTTGGCATTA CAGAGGCAGC GTTCAGACGT
CTTGACCGAA TATTGCTTCG AGCAGTGCAG ATCCTCGAGG AGTGTCCATA TTGCTCGAAA
CATCCAGAGA GTCGTGGTTG CCCTTATTGC GTTACCGCAA GGTATGGCGA TGAAAAAACG
ATCAACCGTT TGGCTGCGCT GGAAATCATT CGTAACTTTC AGTCTTCAAG TTGA
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| Protein sequence | MKMNIIAIRC RRHNRGENPK SFRLLQIALD QGQKRAMRYL TEKDGNIVKG AWSYTSRPFA
PGLYCFHCLN EGIREMIPVD LEDLRDLGLS DLPLVFQSAE SFQAVTLVNS MINRYQDAIR
NIQEFPARSA SFDDNRIING LNPELQHVLQ KKVLPKGGKL YSFQAKAIEV ALNGHDIIIT
TPTASGKSLA YILPVLEATL CSSDATALYI SPLVALTEDQ FEALTIFDES GTDWIRKGER
FSIHRVCRTL VIGSRRVTIA RYDGSVLPGD REEIRRRRPQ YVLTTPDMLH MAMLRGAFDD
RHWRYLLAGL RYIVIDEMHI YRGILGASFA NLIRRLQRLC RLHGTNPQFL CASATMVDPI
GTVERFIGRR PVGVDGSEDG VPQHKRMVVI WSSSVDDGQV YATSTHAKNV LLHLISERVR
HIAFARSIGE INDIYRFTSA ELREQGIDTP LIKPFMRELR PDEKRAIIRD LKDGRLHSVI
STTALSMGID IGSLSAAVII GFPGSIAQFW QQAGRAGRAG EGVIILIADR NPLDQFFVQH
PEVLFDLNAE PVYCNPDNPY IVRSHLLTAA REFPLSDEDF HLFGKAALDQ IQTLTAEGLM
TSDGMGRYEL TESAKNLADT PFRSLTFAVP VKDQEKRLIV EVDAARAQRA LHRHAHYQHI
DRYYRVISCD LDWSRGRGEV VVQELEHPEY TTAAHVEIDI SIIDCQIQRD DEHYVVGYGI
VKCHTRVDGY YEVPLFSRNE PFKYRPLGRA APPPLEYQTQ AFWLLLSPKV LDAISPDERE
AAMYSLAGAL RLATSIEELC DLSDVEGVGM LHFQDVLRPM VMVYDTVPGG VGITEAAFRR
LDRILLRAVQ ILEECPYCSK HPESRGCPYC VTARYGDEKT INRLAALEII RNFQSSS
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