| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2257 |
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| Symbol | |
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| ID | 5209220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 2779011 |
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| End bp | 2780207 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640595858 |
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| Product | RNA polymerase, sigma 32 subunit, RpoH |
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| Protein accession | YP_001276586 |
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| Protein GI | 148656381 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCAAC ATTTTTGCCA CCAGGCGGGA TATGCACAGA ATGACGCATG GCTGACCCGC
GCGCTTGATG AGGTGCTCCA GAAACTCGAT CCTGCGCCAG GAAAGGCGAT CACCTATCGC
CAGATCGATG TTGTGCTCGA TGATGCTGGC ATAGAGCCGG ATCTCGCAAC CCAACTCTAT
GAACGCATCC TGCGAACGCT TGAAGAATGC CAGGTTCAGG TGGTTGAGGC GGAAGAAAGC
GATCTCGGAA ACGACGATTT TGCGACAGAA ATTGCTGATG AAGTCTTCGA GATGCTCGCG
GAAATGATGG GACGAGCCGG TGAATTTGAT CACGAGTTGC TGAGTGCTGC CGATGAACGG
CGCCTGCTCG AGATTTATCA CGACGGATTG CGTGCCAAAC GCGAATTGCA GAGCGGCCTC
AGTTCAGTGC AGCAATATGC CGCCGAGCGA AGGATCAAGG CGTCGGAAGA GGCGATCGAT
ACATTGATGC GCTGCAACCT GCGCCTGGTT GCGAAGATAG CCACGCGTTA TATGCCGTAT
GCCCGACACC TAACCTTCGA TGATCTGCTG CAGGAAGGGC GGATTGGCTT GCTCAAAGCC
ATCGAGAGGT TCGACCAGAA TTGTCGGGGG CGATTATCAA CATATGCCGT CTATTGGATT
CGGCAGTCGA TACAGCGAGC GCTCGCAGAT CAGGATCGTA TGGTTCGCCT GCCGGTTCAT
ATTGTGGAGC AACTTCATCG TTTGCGTAAG ACGTGCGAGC AGTTCCGCTG CATTCACGGT
CGTGAGCCAG GTGATGCTGA GTTGGCAAAT GCACTTGGCG TTTCTCTCGC TAAAGTCCGA
TCTCTGTGGC GTGTTGCGCA GCACCACACA TCTATCGATC GACCGGTTGG TGCAGATACC
AATACTTTCC TGGGGGAATT GATCGCAGAT GATCGCGAGG AGGGTCCAGA TTTCATTTGT
GAGCAACAGT TGCTTCATGC AGTGCTGAGA GAGGTATTGG GTCACCTCTC TAGCCGTGAG
CGTGACATCC TTGAGCGGCG TTATGGTTTG ATCGATGGTC AAACGCATAC TTTGGAGGAA
ATAGGTCAGA TTTTTGGTCT TACACGGGAG AGAATTCGTC AAATCGAGCG AAAAGCGCTC
AAACGTCTTA ATAGAGGTGA ATATCGACGA ATATTACAAC CTTTTCTTTA CCAATGA
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| Protein sequence | MSQHFCHQAG YAQNDAWLTR ALDEVLQKLD PAPGKAITYR QIDVVLDDAG IEPDLATQLY
ERILRTLEEC QVQVVEAEES DLGNDDFATE IADEVFEMLA EMMGRAGEFD HELLSAADER
RLLEIYHDGL RAKRELQSGL SSVQQYAAER RIKASEEAID TLMRCNLRLV AKIATRYMPY
ARHLTFDDLL QEGRIGLLKA IERFDQNCRG RLSTYAVYWI RQSIQRALAD QDRMVRLPVH
IVEQLHRLRK TCEQFRCIHG REPGDAELAN ALGVSLAKVR SLWRVAQHHT SIDRPVGADT
NTFLGELIAD DREEGPDFIC EQQLLHAVLR EVLGHLSSRE RDILERRYGL IDGQTHTLEE
IGQIFGLTRE RIRQIERKAL KRLNRGEYRR ILQPFLYQ
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